From 05a0940c238b087c9bbf548d7664e1a70c050112 Mon Sep 17 00:00:00 2001
From: tcarver <tjc>
Date: Fri, 20 Jan 2012 15:55:47 +0000
Subject: [PATCH] fix for repainting snp and coverage plot when zoomed in

---
 uk/ac/sanger/artemis/components/alignment/BamView.java | 9 +++++----
 1 file changed, 5 insertions(+), 4 deletions(-)

diff --git a/uk/ac/sanger/artemis/components/alignment/BamView.java b/uk/ac/sanger/artemis/components/alignment/BamView.java
index 64f11d106..89ef6f1dc 100644
--- a/uk/ac/sanger/artemis/components/alignment/BamView.java
+++ b/uk/ac/sanger/artemis/components/alignment/BamView.java
@@ -802,11 +802,12 @@ public class BamView extends JPanel
 	    drawStrandStackView(g2, seqLength, pixPerBase, start, end);
 	  else
 	    drawLineView(g2, seqLength, pixPerBase, start, end);
-	  if(isCoverage)
-	    coveragePanel.repaint();
-	  if(isSNPplot)
-	    snpPanel.repaint();
 	}
+    
+    if(isCoverage)
+      coveragePanel.repaint();
+    if(isSNPplot)
+      snpPanel.repaint();
 
 	if(waitingFrame.isVisible())
       waitingFrame.hideFrame();
-- 
GitLab