diff --git a/uk/ac/sanger/artemis/components/variant/AbstractVCFReader.java b/uk/ac/sanger/artemis/components/variant/AbstractVCFReader.java index 8692e021d013fb4482d79b682eb11b9196cb98a6..4fd7c1e519761c39ae1a72b649efd44b6268623b 100644 --- a/uk/ac/sanger/artemis/components/variant/AbstractVCFReader.java +++ b/uk/ac/sanger/artemis/components/variant/AbstractVCFReader.java @@ -32,6 +32,7 @@ import java.nio.ByteOrder; public abstract class AbstractVCFReader { + private boolean vcf_v4 = false; protected abstract String[] getSeqNames(); protected abstract String getFileName(); @@ -61,4 +62,20 @@ public abstract class AbstractVCFReader File f = new File(getFileName()); return f.getName(); } + + /** + * @return the vcf_v4 + */ + protected boolean isVcf_v4() + { + return vcf_v4; + } + + /** + * @param vcfV4 the vcf_v4 to set + */ + protected void setVcf_v4(boolean vcfV4) + { + vcf_v4 = vcfV4; + } } \ No newline at end of file