diff --git a/Makefile b/Makefile
index 36b41f5507e5bdab5a21e3a2a0c57e06d4f9919e..ae307b622ab899323fe3edf754401b0c461aef66 100644
--- a/Makefile
+++ b/Makefile
@@ -1,6 +1,6 @@
 # This is a GNU Makefile for Artemis
 
-# $Header: //tmp/pathsoft/artemis/Makefile,v 1.27 2007-03-01 14:37:57 tjc Exp $
+# $Header: //tmp/pathsoft/artemis/Makefile,v 1.28 2007-03-02 09:41:16 tjc Exp $
 
 SHELL=/bin/sh
 
@@ -269,6 +269,10 @@ artemis.jar : $(CLASSES)
             jar xvf $$fileJar; \
             rm -rf META-INF/MANIFEST.MF; \
           done; \
+          for fileJar in ../lib/ibatis/*.jar; do \
+            jar xvf $$fileJar; \
+            rm -rf META-INF/MANIFEST.MF; \
+          done; \
         fi; \
 	cp -R ../lib/LICENSE.Apache ../uk ../nsdb ../type ../seqdb ../etc ../images ../lib/j2ssh/j2ssh.properties \
 	      ../images/icon.gif ../images/helix.gif ../images/sanger-centre.gif ../README .