From 269bfef8eee7a502dcb1b23c6b703b1ad8f0c32c Mon Sep 17 00:00:00 2001
From: tcarver <tjc>
Date: Thu, 4 Apr 2013 16:42:51 +0100
Subject: [PATCH] update picard
---
uk/ac/sanger/artemis/util/FTPSeekableStream.java | 9 ++++++++-
1 file changed, 8 insertions(+), 1 deletion(-)
diff --git a/uk/ac/sanger/artemis/util/FTPSeekableStream.java b/uk/ac/sanger/artemis/util/FTPSeekableStream.java
index 9e5f0d229..5f444825e 100644
--- a/uk/ac/sanger/artemis/util/FTPSeekableStream.java
+++ b/uk/ac/sanger/artemis/util/FTPSeekableStream.java
@@ -15,7 +15,7 @@ import org.apache.commons.net.ftp.FTPFile;
import org.apache.commons.net.ftp.FTPReply;
import org.apache.log4j.Logger;
-import net.sf.samtools.util.SeekableStream;
+import net.sf.samtools.seekablestream.SeekableStream;
/**
* Written independently to, but bugfixed by looking at the Savant
@@ -321,4 +321,11 @@ public class FTPSeekableStream extends SeekableStream {
}
+ @Override
+ public long position() throws IOException
+ {
+ // TODO Auto-generated method stub
+ return 0;
+ }
+
}
--
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