From 2aefc158de94e0d02af1a12c30b22e2a43714985 Mon Sep 17 00:00:00 2001
From: tjc <tjc@ee4ac58c-ac51-4696-9907-e4b3aa274f04>
Date: Tue, 25 May 2010 11:37:49 +0000
Subject: [PATCH] fixes
git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@13901 ee4ac58c-ac51-4696-9907-e4b3aa274f04
---
etc/run_blastp.sanger | 6 ++----
1 file changed, 2 insertions(+), 4 deletions(-)
diff --git a/etc/run_blastp.sanger b/etc/run_blastp.sanger
index b5e5cc29e..c70da9181 100755
--- a/etc/run_blastp.sanger
+++ b/etc/run_blastp.sanger
@@ -260,10 +260,8 @@ for($count = 0; $count < @bsub_jobs; $count++)
if($count == @bsub_jobs-1)
{
-# print BSUB "zip -j ${dirname}blastp.zip ${dirname}\*out.gz\n";
-# print BSUB "rm -f ${dirname}\*out.gz\n";
- print BSUB "find ${dirname} -name '\*out.gz' -maxdepth 1 -print | xargs zip -j ${dirname}blastp.zip\n";
- print BSUB "find ${dirname} -name '\*out.gz' -maxdepth 1 -print | xargs rm -f\n";
+ print BSUB "find ${dirname} -maxdepth 1 -name \"\*out.gz\" -print | xargs zip -j ${dirname}blastp.zip\n";
+ print BSUB "find ${dirname} -maxdepth 1 -name \"\*out.gz\" -print | xargs rm -f\n";
}
print BSUB "\"echo finished > /dev/null\" > /dev/null 2> /dev/null";
close BSUB; # or die "--Could not submit job : $!";
--
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