From 2b0a50fc3749313ad40744e6d80d16f798b8142a Mon Sep 17 00:00:00 2001
From: tcarver <tjc>
Date: Fri, 15 Nov 2013 13:51:59 +0000
Subject: [PATCH] call GFFUtils.updateSegmentRangeStore() for GFF features on
feature location change
---
uk/ac/sanger/artemis/components/FeatureDisplay.java | 9 +++++++++
1 file changed, 9 insertions(+)
diff --git a/uk/ac/sanger/artemis/components/FeatureDisplay.java b/uk/ac/sanger/artemis/components/FeatureDisplay.java
index 611734d25..fee5c66df 100644
--- a/uk/ac/sanger/artemis/components/FeatureDisplay.java
+++ b/uk/ac/sanger/artemis/components/FeatureDisplay.java
@@ -33,6 +33,7 @@ import uk.ac.sanger.artemis.util.FileDocument;
import uk.ac.sanger.artemis.util.OutOfRangeException;
import uk.ac.sanger.artemis.util.StringVector;
import uk.ac.sanger.artemis.io.ChadoCanonicalGene;
+import uk.ac.sanger.artemis.io.GFFUtils;
import uk.ac.sanger.artemis.io.InvalidRelationException;
import uk.ac.sanger.artemis.io.Qualifier;
import uk.ac.sanger.artemis.io.Range;
@@ -975,6 +976,14 @@ public class FeatureDisplay extends EntryGroupPanel
if(!getEntryGroup().contains(event_feature))
return;
+ if( event.getType() == FeatureChangeEvent.LOCATION_CHANGED &&
+ event_feature.getEmblFeature() instanceof GFFStreamFeature &&
+ !GeneUtils.isDatabaseEntry(event_feature.getEmblFeature()))
+ {
+ GFFUtils.updateSegmentRangeStore((GFFStreamFeature)event_feature.getEmblFeature(),
+ event.getOldLocation(), event.getNewLocation());
+ }
+
// if the feature is visible now or is in the list of visible features
//(ie. it was visible previously) then redisplay.
if(featureVisible(event_feature) ||
--
GitLab