From 2cb2fe3e48333a15057e7a7521a2cf5408587c5b Mon Sep 17 00:00:00 2001
From: tcarver <tjc>
Date: Wed, 12 Feb 2014 14:58:41 +0000
Subject: [PATCH] fix for writing GFF qualifiers and stripping out current=
---
uk/ac/sanger/artemis/io/GFFStreamFeature.java | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/uk/ac/sanger/artemis/io/GFFStreamFeature.java b/uk/ac/sanger/artemis/io/GFFStreamFeature.java
index bfec1da89..8e1f8b11e 100644
--- a/uk/ac/sanger/artemis/io/GFFStreamFeature.java
+++ b/uk/ac/sanger/artemis/io/GFFStreamFeature.java
@@ -820,7 +820,7 @@ public class GFFStreamFeature extends SimpleDocumentFeature implements
int index = values.elementAt(value_index).indexOf(";current=");
if (index > -1)
this_value = GFF3Encoder.encode(values.elementAt(value_index)
- .substring(0, index - 1));
+ .substring(0, index));
else
this_value = GFF3Encoder.encode(values.elementAt(value_index));
if (value_index > 0 && value_index < (values.size())) {
--
GitLab