From 35125912b57a23bc9cb6fce68db41e13c49dcb12 Mon Sep 17 00:00:00 2001
From: tcarver <tjc>
Date: Fri, 6 Jan 2012 12:53:44 +0000
Subject: [PATCH] fix for VCF file parse()
---
uk/ac/sanger/artemis/components/variant/VCFRecord.java | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/uk/ac/sanger/artemis/components/variant/VCFRecord.java b/uk/ac/sanger/artemis/components/variant/VCFRecord.java
index cdb0a88d8..b3079ac68 100644
--- a/uk/ac/sanger/artemis/components/variant/VCFRecord.java
+++ b/uk/ac/sanger/artemis/components/variant/VCFRecord.java
@@ -95,7 +95,7 @@ public class VCFRecord
rec.filter = parts[6];
rec.info = parts[7];
- if(parts.length > 10)
+ if(parts.length > 9)
{
rec.format = (parts[8]).trim();
final int nfmt = countOccurrences(rec.format, ':')+1; //rec.format.split(":").length;
--
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