From 421e94ed5bcc11ed64e71258fdf05ef03c218031 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?=E2=80=9Ckpepper=E2=80=9D?= <kp11@sanger.ac.uk>
Date: Mon, 24 Sep 2018 15:07:45 +0100
Subject: [PATCH] Updated picard jar to 2.18.14, which includes fixes for
 htsdjk github issues 1065 and 1127

---
 pom.xml | 5 +++--
 1 file changed, 3 insertions(+), 2 deletions(-)

diff --git a/pom.xml b/pom.xml
index 8ffcd7916..ebaa32d59 100644
--- a/pom.xml
+++ b/pom.xml
@@ -246,11 +246,12 @@
 		<!-- Start of Picard jars -->
 		
 		<!-- https://mvnrepository.com/artifact/com.github.broadinstitute/picard -->
-		<!--  Latest as of 4th Jun 2018 -->
+		<!-- Latest as of 24th Set 2018 -->
+		<!--  It contains two htsjdk fixes for CRAM index caching and the query mate issue -->
 		<dependency>
 		    <groupId>com.github.broadinstitute</groupId>
 		    <artifactId>picard</artifactId>
-		    <version>2.18.4</version>
+		    <version>2.18.14</version>
 		</dependency>
 		
 		<!-- End of Picard jars -->
-- 
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