From 4584bdb5d20c96c9738ea480d6ed8dac3baa3606 Mon Sep 17 00:00:00 2001
From: tcarver <tjc>
Date: Mon, 26 Sep 2011 12:45:13 +0100
Subject: [PATCH] strip out product with field for EMBL files
---
uk/ac/sanger/artemis/io/PublicDBDocumentEntry.java | 8 ++++++--
1 file changed, 6 insertions(+), 2 deletions(-)
diff --git a/uk/ac/sanger/artemis/io/PublicDBDocumentEntry.java b/uk/ac/sanger/artemis/io/PublicDBDocumentEntry.java
index afcf17383..c86dba9b6 100644
--- a/uk/ac/sanger/artemis/io/PublicDBDocumentEntry.java
+++ b/uk/ac/sanger/artemis/io/PublicDBDocumentEntry.java
@@ -419,10 +419,14 @@ public class PublicDBDocumentEntry extends SimpleDocumentEntry
String val = (String)newValues.get(j);
int ind = 0;
- if((ind=val.indexOf(";db_xref="))>-1)
+
+ if((ind=val.indexOf(";db_xref="))>-1 && this instanceof EmblDocumentEntry)
+ val = val.substring(0,ind);
+
+ if((ind=val.indexOf(";evidence="))>-1 && this instanceof EmblDocumentEntry)
val = val.substring(0,ind);
- if((ind=val.indexOf(";evidence="))>-1)
+ if((ind=val.indexOf(";with="))>-1 && this instanceof EmblDocumentEntry)
val = val.substring(0,ind);
if(val.startsWith("term="))
--
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