diff --git a/uk/ac/sanger/artemis/components/alignment/BamView.java b/uk/ac/sanger/artemis/components/alignment/BamView.java index 5bb1afdf0a4021863a3620fa71eb78e4a0656384..4534159779eb68c53233f2318e1d00c0a79339df 100644 --- a/uk/ac/sanger/artemis/components/alignment/BamView.java +++ b/uk/ac/sanger/artemis/components/alignment/BamView.java @@ -172,7 +172,7 @@ public class BamView extends JPanel private JCheckBoxMenuItem logMenuItem = new JCheckBoxMenuItem("Use Log Scale", logScale); private JCheckBoxMenuItem checkBoxStackView = new JCheckBoxMenuItem("Stack View"); private JCheckBoxMenuItem baseQualityColour = new JCheckBoxMenuItem("Colour by Base Quality");; - private JCheckBoxMenuItem markInsertions = new JCheckBoxMenuItem("Mark Insertions"); + private JCheckBoxMenuItem markInsertions = new JCheckBoxMenuItem("Mark Insertions", true); private AlphaComposite translucent = AlphaComposite.getInstance(AlphaComposite.SRC_OVER, 0.6f); @@ -250,7 +250,7 @@ public class BamView extends JPanel if(value instanceof javax.swing.plaf.FontUIResource) UIManager.put(key, font_ui_resource); } - + setFont(Options.getOptions().getFont()); FontMetrics fm = getFontMetrics(getFont()); ALIGNMENT_PIX_PER_BASE = fm.charWidth('M');