From 4c00d6156b69cfe9b960f1bcf839ac27b2f5dad3 Mon Sep 17 00:00:00 2001 From: tjc <tjc@ee4ac58c-ac51-4696-9907-e4b3aa274f04> Date: Thu, 21 Apr 2005 13:11:51 +0000 Subject: [PATCH] tidy git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@2406 ee4ac58c-ac51-4696-9907-e4b3aa274f04 --- uk/ac/sanger/artemis/io/GFFDocumentEntry.java | 10 +++------- 1 file changed, 3 insertions(+), 7 deletions(-) diff --git a/uk/ac/sanger/artemis/io/GFFDocumentEntry.java b/uk/ac/sanger/artemis/io/GFFDocumentEntry.java index 00b4e2be6..12a62c455 100644 --- a/uk/ac/sanger/artemis/io/GFFDocumentEntry.java +++ b/uk/ac/sanger/artemis/io/GFFDocumentEntry.java @@ -20,14 +20,14 @@ * along with this program; if not, write to the Free Software * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. * - * $Header: //tmp/pathsoft/artemis/uk/ac/sanger/artemis/io/GFFDocumentEntry.java,v 1.8 2005-04-21 13:01:26 tjc Exp $ + * $Header: //tmp/pathsoft/artemis/uk/ac/sanger/artemis/io/GFFDocumentEntry.java,v 1.9 2005-04-21 13:11:51 tjc Exp $ */ package uk.ac.sanger.artemis.io; import uk.ac.sanger.artemis.util.*; -import java.io.*; +import java.io.IOException; import java.util.Hashtable; import java.util.Enumeration; import java.util.Vector; @@ -36,7 +36,7 @@ import java.util.Vector; * A DocumentEntry that can read an GFF entry from a Document. * * @author Kim Rutherford - * @version $Id: GFFDocumentEntry.java,v 1.8 2005-04-21 13:01:26 tjc Exp $ + * @version $Id: GFFDocumentEntry.java,v 1.9 2005-04-21 13:11:51 tjc Exp $ **/ public class GFFDocumentEntry extends SimpleDocumentEntry @@ -61,7 +61,6 @@ public class GFFDocumentEntry extends SimpleDocumentEntry // join the separate exons into one feature (if appropriate) combineFeatures(); - finished_constructor = true; } @@ -81,7 +80,6 @@ public class GFFDocumentEntry extends SimpleDocumentEntry throws EntryInformationException { super(new GFFEntryInformation(), new_entry, force); - finished_constructor = true; } @@ -94,7 +92,6 @@ public class GFFDocumentEntry extends SimpleDocumentEntry public GFFDocumentEntry(final EntryInformation entry_information) { super(new GFFEntryInformation()); - finished_constructor = true; } @@ -148,7 +145,6 @@ public class GFFDocumentEntry extends SimpleDocumentEntry Hashtable this_strand_feature_groups; String group_name = null; - // find the genes Vector genes = new Vector(); for(int i = 0 ; i < original_features.size() ; ++i) -- GitLab