From 5020df02fb16e76b814bcc0351def5d01790c328 Mon Sep 17 00:00:00 2001
From: tjc <tjc@ee4ac58c-ac51-4696-9907-e4b3aa274f04>
Date: Wed, 18 Jun 2008 09:54:17 +0000
Subject: [PATCH] change path to flexi_blast

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8005 ee4ac58c-ac51-4696-9907-e4b3aa274f04
---
 lib/j2ssh/j2ssh.properties | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/lib/j2ssh/j2ssh.properties b/lib/j2ssh/j2ssh.properties
index 3c2100492..92a93bd25 100644
--- a/lib/j2ssh/j2ssh.properties
+++ b/lib/j2ssh/j2ssh.properties
@@ -13,10 +13,10 @@ host=localhost
 # 
 #bsub=bsub -q normal -n 1 -R 'select[blast && mem > 500] rusage[mem=500]' 
 bsub=bsub -q normal -n 1 -R 'select[mem > 500] rusage[mem=500]' 
-blastp=-I /nfs/pathsoft/prod/perl/flexi_blast.pl -p 
-blastx=-I /nfs/pathsoft/prod/perl/flexi_blast.pl -x
-tblastx=-I /nfs/pathsoft/prod/perl/flexi_blast.pl -tx
-blastn=-I /nfs/pathsoft/prod/perl/flexi_blast.pl
+blastp=-I /software/pathogen/psu_cvs/genexec/perl/src/flexi_blast.pl -p 
+blastx=-I /software/pathogen/psu_cvs/genexec/perl/src/flexi_blast.pl -x
+tblastx=-I /software/pathogen/psu_cvs/genexec/perl/src/flexi_blast.pl -tx
+blastn=-I /software/pathogen/psu_cvs/genexec/perl/src/flexi_blast.pl
 
 #fasta=-I /nfs/disk222/yeastpub/bio-soft/fasta/fasta33_t -B -S -q -b 100 -H -l /nfs/disk222/yeastpub/bio-soft/fasta/pubseqgbs
 #fastx=-I /nfs/disk222/yeastpub/bio-soft/fasta/fastx33_t -B -S -q -b 40 -H -l /nfs/disk222/yeastpub/bio-soft/fasta/pubseqgbs
-- 
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