From 50d92b721e43b1c0fb217a5ff3a38a32d217a90e Mon Sep 17 00:00:00 2001
From: tjc <tjc@ee4ac58c-ac51-4696-9907-e4b3aa274f04>
Date: Fri, 30 Mar 2007 14:41:15 +0000
Subject: [PATCH] tidy
git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@5843 ee4ac58c-ac51-4696-9907-e4b3aa274f04
---
.../sanger/artemis/editor/DataCollectionPane.java | 2 +-
uk/ac/sanger/artemis/editor/FastaTextPane.java | 14 +++++++-------
2 files changed, 8 insertions(+), 8 deletions(-)
diff --git a/uk/ac/sanger/artemis/editor/DataCollectionPane.java b/uk/ac/sanger/artemis/editor/DataCollectionPane.java
index 727999ab6..fcfbf6318 100644
--- a/uk/ac/sanger/artemis/editor/DataCollectionPane.java
+++ b/uk/ac/sanger/artemis/editor/DataCollectionPane.java
@@ -931,7 +931,7 @@ public class DataCollectionPane extends JScrollPane
* @param goHash Hashtable of GO id's and description.
*
*/
- public void getGoHash(String filename, Hashtable goHash)
+ protected void getGoHash(String filename, Hashtable goHash)
{
try
{
diff --git a/uk/ac/sanger/artemis/editor/FastaTextPane.java b/uk/ac/sanger/artemis/editor/FastaTextPane.java
index b4db2cbab..cf4ab20f6 100644
--- a/uk/ac/sanger/artemis/editor/FastaTextPane.java
+++ b/uk/ac/sanger/artemis/editor/FastaTextPane.java
@@ -123,12 +123,12 @@ public class FastaTextPane extends JScrollPane
return format;
}
- protected void setTextAreaFont(Font f)
+ private void setTextAreaFont(Font f)
{
textArea.setFont(f);
}
- protected InputStream getInputStream()
+ private InputStream getInputStream()
throws IOException
{
FileInputStream inStream = new FileInputStream(dataFile);
@@ -144,7 +144,7 @@ public class FastaTextPane extends JScrollPane
* BLASTP are supported.
*
*/
- protected String getResultsFormat()
+ private String getResultsFormat()
{
File fn = dataFile;
@@ -188,7 +188,7 @@ public class FastaTextPane extends JScrollPane
}
- protected StringBuffer readBLASTPFile(String format)
+ private StringBuffer readBLASTPFile(final String format)
{
//File fn = dataFile;
StringBuffer sbuff = new StringBuffer();
@@ -387,7 +387,7 @@ public class FastaTextPane extends JScrollPane
}
- protected StringBuffer readFASTAFile(String format)
+ private StringBuffer readFASTAFile(final String format)
{
//File fn = dataFile;
StringBuffer sbuff = new StringBuffer();
@@ -931,7 +931,7 @@ public class FastaTextPane extends JScrollPane
return null;
}
- protected static String insertNewline(String s1, String s2)
+ protected static String insertNewline(String s1, final String s2)
{
int index = 0;
while((index = s1.indexOf(s2, index)) > -1)
@@ -1016,7 +1016,7 @@ public class FastaTextPane extends JScrollPane
return res;
}
- public void show(Object obj)
+ protected void show(Object obj)
{
if(obj instanceof HitInfo)
{
--
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