From 5db46459a06486de67b9768e5d366c910c633f53 Mon Sep 17 00:00:00 2001 From: tcarver <tjc> Date: Mon, 23 Apr 2012 12:31:20 +0100 Subject: [PATCH] update to path to flexi_blast.pl --- lib/j2ssh/j2ssh.properties | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/lib/j2ssh/j2ssh.properties b/lib/j2ssh/j2ssh.properties index f08f6b5c0..e91614b95 100644 --- a/lib/j2ssh/j2ssh.properties +++ b/lib/j2ssh/j2ssh.properties @@ -13,10 +13,10 @@ host=localhost # #bsub=bsub -q normal -n 1 -R 'select[blast && mem > 500] rusage[mem=500]' bsub=bsub -q normal -n 1 -R 'select[mem > 500] rusage[mem=500]' -blastp=-I /software/pathogen/psu_cvs/genexec/perl/src/flexi_blast.pl -p -blastx=-I /software/pathogen/psu_cvs/genexec/perl/src/flexi_blast.pl -x -tblastx=-I /software/pathogen/psu_cvs/genexec/perl/src/flexi_blast.pl -tx -blastn=-I /software/pathogen/psu_cvs/genexec/perl/src/flexi_blast.pl +blastp=-I /software/pathogen/psu_svn/trunk/genexec/perl/src/flexi_blast.pl -p +blastx=-I /software/pathogen/psu_svn/trunk/genexec/perl/src/flexi_blast.pl -x +tblastx=-I /software/pathogen/psu_svn/trunk/genexec/perl/src/flexi_blast.pl -tx +blastn=-I /software/pathogen/psu_svn/trunk/genexec/perl/src/flexi_blast.pl #fasta=-I /nfs/disk222/yeastpub/bio-soft/fasta/fasta33_t -B -S -q -b 100 -H -l /nfs/disk222/yeastpub/bio-soft/fasta/pubseqgbs #fastx=-I /nfs/disk222/yeastpub/bio-soft/fasta/fastx33_t -B -S -q -b 40 -H -l /nfs/disk222/yeastpub/bio-soft/fasta/pubseqgbs -- GitLab