From 5de230751fe754512d6eff91b32641f7fc90b4ab Mon Sep 17 00:00:00 2001
From: tjc <tjc@ee4ac58c-ac51-4696-9907-e4b3aa274f04>
Date: Thu, 7 May 2009 08:25:25 +0000
Subject: [PATCH] change double quotes to single quotes
git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@10736 ee4ac58c-ac51-4696-9907-e4b3aa274f04
---
uk/ac/sanger/artemis/io/GFFStreamFeature.java | 25 ++++++++++++++++---
1 file changed, 22 insertions(+), 3 deletions(-)
diff --git a/uk/ac/sanger/artemis/io/GFFStreamFeature.java b/uk/ac/sanger/artemis/io/GFFStreamFeature.java
index e83e661aa..24b3cecb8 100644
--- a/uk/ac/sanger/artemis/io/GFFStreamFeature.java
+++ b/uk/ac/sanger/artemis/io/GFFStreamFeature.java
@@ -20,7 +20,7 @@
* along with this program; if not, write to the Free Software
* Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.
*
- * $Header: //tmp/pathsoft/artemis/uk/ac/sanger/artemis/io/GFFStreamFeature.java,v 1.66 2009-04-17 13:38:44 tjc Exp $
+ * $Header: //tmp/pathsoft/artemis/uk/ac/sanger/artemis/io/GFFStreamFeature.java,v 1.67 2009-05-07 08:25:25 tjc Exp $
*/
package uk.ac.sanger.artemis.io;
@@ -50,7 +50,7 @@ import uk.ac.sanger.artemis.util.StringVector;
* A StreamFeature that thinks it is a GFF feature.
*
* @author Kim Rutherford
- * @version $Id: GFFStreamFeature.java,v 1.66 2009-04-17 13:38:44 tjc Exp $
+ * @version $Id: GFFStreamFeature.java,v 1.67 2009-05-07 08:25:25 tjc Exp $
**/
public class GFFStreamFeature extends SimpleDocumentFeature
@@ -91,7 +91,9 @@ public class GFFStreamFeature extends SimpleDocumentFeature
private short duplicate = 0;
private boolean lazyLoaded = false;
private org.gmod.schema.sequence.Feature chadoLazyFeature;
+ private boolean readOnlyFeature = false;
+
private static String MAP_DECODE[][] = {
{ " ", "%20" }, // white space
{ ",", "%2C" }, // comma
@@ -101,7 +103,8 @@ public class GFFStreamFeature extends SimpleDocumentFeature
{ " ", "+" }, // white space
{ "+", "%2B" },
{ "(", "%28" }, // left bracket
- { ")", "%29" } // right bracket
+ { ")", "%29" }, // right bracket
+ { "'", "\"" }
};
private static String MAP_ENCODE[][] = {
@@ -1201,7 +1204,23 @@ public class GFFStreamFeature extends SimpleDocumentFeature
qualifier.addValue(date_format.format(timelastmodified));
}
+
+ /**
+ * Returns true if and only if this Feature can't be changed or can't be
+ * removed from it's entry.
+ **/
+ public boolean isReadOnly ()
+ {
+ if(readOnlyFeature)
+ return true;
+ return super.isReadOnly();
+ }
+ public void setReadOnlyFeature(boolean readOnlyFeature)
+ {
+ this.readOnlyFeature = readOnlyFeature;
+ }
+
public ChadoCanonicalGene getChadoGene()
{
return chadoGene;
--
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