diff --git a/docs/next_gen.sgml b/docs/next_gen.sgml index 7bacc39c4b3ccbb8f9df510168e8d0c84f9ad95f..a8d7bffbf635fb4a98358316620a2feacfc1db72 100644 --- a/docs/next_gen.sgml +++ b/docs/next_gen.sgml @@ -6,7 +6,7 @@ to be indexed as described below. They require &prog; to be run with at least Java 1.6. </PARA> <PARA> -BAM files need to be sorted and indexed using <ULINK +<ULINK URL="http://samtools.sourceforge.net/">BAM</ULINK> files need to be sorted and indexed using <ULINK URL="http://samtools.sourceforge.net/">samtools</ULINK>. The index file should be in the same directory as the BAM file. This provides an integrated <ULINK URL="http://bamview.sourceforge.net/">BamView</ULINK> panel in &prog;, displaying