diff --git a/docs/options_menu.sgml b/docs/options_menu.sgml index b2e577086b03d468defd08ffd5299779289d3401..6b312236cbf2a2b2544f5d00abe9a2494f43ea2e 100644 --- a/docs/options_menu.sgml +++ b/docs/options_menu.sgml @@ -21,19 +21,17 @@ because it can have surprising results unless the user is expecting it. See </SECT3> <SECT3 ID="LAUNCH-WINDOW-OPTIONS-EUK"> - <TITLE>Eukaroytic Mode</TITLE> + <TITLE>Genetic Code Tables</TITLE> <PARA> -If this toggle is on, &prog; will use the eukaroytic start codon (ATG). If -this toggle is off it will use the prokaryotic start codons (ATG, GTG and -TTG). This setting effects the display of start codons (see <XREF +These options make all the +<ULINK +http://www3.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi?mode=c +NCBI Genetic Codes</ULINK> available. The default setting is the +Standard Code. This setting effects the display of start codons (see <XREF LINKEND="VIEWS-POPUPMENU-TOGGLES-STARTCODONS">) and the "Suspicious Start Codons ..." feature filter (see <XREF LINKEND="VIEWMENU-FEATURE-FILTERS-SUSPSTART">). </PARA> - <PARA> -This can be set in the options file (see <XREF -LINKEND="OPTIONS-ORGANISMTYPE">). - </PARA> </SECT3> <SECT3 ID="LAUNCH-WINDOW-OPTIONS-HIGHLIGHTACTIVE">