diff --git a/uk/ac/sanger/artemis/sequence/BasePattern.java b/uk/ac/sanger/artemis/sequence/BasePattern.java index df8006fe08a6ac4cb3c6c3e6226c7ff705f5e61f..86ea74fd283d68436245b915c79bd0ab0ca1c1a0 100644 --- a/uk/ac/sanger/artemis/sequence/BasePattern.java +++ b/uk/ac/sanger/artemis/sequence/BasePattern.java @@ -56,7 +56,7 @@ public class BasePattern { /** * A return value of patternType () - illegal characters in the pattern. **/ - private static int ILLEGAL_PATTERN = -1; + public static int ILLEGAL_PATTERN = -1; /** * A return value of patternType () - the pattern contains only the @@ -415,7 +415,7 @@ public class BasePattern { * if the pattern contains only the characters a,t,g,c,r,y,k,m,s,w,n,b,d,h * and v, ie IUC base codes. **/ - private static int patternType (String pattern_string) { + public static int patternType (String pattern_string) { boolean seen_iuc = false; for (int i = 0 ; i < pattern_string.length () ; ++i) {