diff --git a/docs/menus.sgml b/docs/menus.sgml index 4fcd2b4584cc583757edc42277ad8737ac17b40f..3ed7b4a4e57e1b5889f7e9e7ad7ae246cd2203ed 100644 --- a/docs/menus.sgml +++ b/docs/menus.sgml @@ -834,6 +834,36 @@ Pressing the <LITERAL>Goto Feature</LITERAL> button has the same effect as the LINKEND="GOTOMENU-GOTO-SELECTION-START"> for more). </PARA> </LISTITEM> + <LISTITEM> + <PARA> +The <LITERAL>User Qualifiers</LITERAL> button opens a tool for maintaining +user defined lists of qualifiers (i.e. qualifiers in the form tag = value pairs +on separate lines) and the option to read qualifiers from <ULINK +URL="http://www.geneontology.org/GO.format.shtml" TYPE="external">OBO</ULINK> formatted files or +URLs. These can be optionally saved between sessions in the file '.artemis.qualifiers' in the +home directory. In the intial screen (below) you are invited to import your +qualifier list from the File menu. + </PARA> + <MEDIAOBJECT> + <IMAGEOBJECT> + <IMAGEDATA FORMAT="gif" FILEREF="qualifier_list.gif"> + </IMAGEOBJECT> + </MEDIAOBJECT> + + <PARA> +When a qualifier list or OBO file has been added then it is possible to search for +keywords and the qualifer added to the current feature or added to selected features +in &prog;. + </PARA> + + <MEDIAOBJECT> + <IMAGEOBJECT> + <IMAGEDATA FORMAT="gif" FILEREF="qualifier_list2.gif"> + </IMAGEOBJECT> + </MEDIAOBJECT> + + + </LISTITEM> </ITEMIZEDLIST> </LISTITEM>