From 8858d0af21dd875d8f52db7f5cc59e916f00c3ec Mon Sep 17 00:00:00 2001
From: tcarver <tjc>
Date: Thu, 15 Aug 2013 16:03:43 +0100
Subject: [PATCH] change isFminPartial / isFmaxPartial to Start_range /
End_range
---
uk/ac/sanger/artemis/components/FeatureList.java | 13 ++++---------
1 file changed, 4 insertions(+), 9 deletions(-)
diff --git a/uk/ac/sanger/artemis/components/FeatureList.java b/uk/ac/sanger/artemis/components/FeatureList.java
index 5648d85fe..72ad6190b 100644
--- a/uk/ac/sanger/artemis/components/FeatureList.java
+++ b/uk/ac/sanger/artemis/components/FeatureList.java
@@ -110,8 +110,6 @@ public class FeatureList extends EntryGroupPanel
/** JScrollPane viewport that this panel is the view of */
private JViewport viewport = null;
-
- private boolean isDatabaseGroup = false;
/**
* Create a new FeatureList with the default number of rows.
@@ -128,8 +126,6 @@ public class FeatureList extends EntryGroupPanel
{
super(entry_group, selection, goto_event_source, base_plot_group);
- isDatabaseGroup = GeneUtils.isDatabaseEntry(getEntryGroup());
-
addMouseListener(new MouseAdapter()
{
private FeaturePopup popup = null;
@@ -760,7 +756,7 @@ public class FeatureList extends EntryGroupPanel
else
{
String note = null;
- if(isDatabaseGroup)
+ if(feature.getEmblFeature() instanceof GFFStreamFeature)
{
try
{
@@ -812,15 +808,14 @@ public class FeatureList extends EntryGroupPanel
high_pos = String.valueOf(low_marker.getRawPosition());
}
}
-
- if(isDatabaseGroup)
+ if(feature.getEmblFeature() instanceof GFFStreamFeature)
{
try
{
- if(feature.getQualifierByName("isFminPartial") != null)
+ if(feature.getQualifierByName("Start_range") != null)
low_pos = "<"+low_pos;
- if(feature.getQualifierByName("isFmaxPartial") != null)
+ if(feature.getQualifierByName("End_range") != null)
high_pos = ">"+high_pos;
}
catch (InvalidRelationException e){}
--
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