From 88b996f903d6deaac7f73c142f1df0f4a7eb075d Mon Sep 17 00:00:00 2001
From: tjc <tjc@ee4ac58c-ac51-4696-9907-e4b3aa274f04>
Date: Tue, 20 Mar 2007 10:07:42 +0000
Subject: [PATCH] added getDatabaseNames
git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@5700 ee4ac58c-ac51-4696-9907-e4b3aa274f04
---
.../sanger/artemis/util/DatabaseDocument.java | 31 ++++++++++++++++++-
1 file changed, 30 insertions(+), 1 deletion(-)
diff --git a/uk/ac/sanger/artemis/util/DatabaseDocument.java b/uk/ac/sanger/artemis/util/DatabaseDocument.java
index 14888c881..27b1355b2 100644
--- a/uk/ac/sanger/artemis/util/DatabaseDocument.java
+++ b/uk/ac/sanger/artemis/util/DatabaseDocument.java
@@ -46,6 +46,7 @@ import org.gmod.schema.sequence.FeatureCvTermProp;
import org.gmod.schema.sequence.FeatureCvTermDbXRef;
import org.gmod.schema.sequence.FeatureCvTermPub;
import org.gmod.schema.cv.CvTerm;
+import org.gmod.schema.general.Db;
import org.gmod.schema.general.DbXRef;
import org.gmod.schema.pub.PubDbXRef;
import org.gmod.schema.pub.Pub;
@@ -81,7 +82,7 @@ public class DatabaseDocument extends Document
private String schema = "public";
private static Hashtable cvterms;
-
+
private InputStreamProgressListener progress_listener;
/** JDBC DAO */
@@ -1345,6 +1346,34 @@ public class DatabaseDocument extends Document
return cvterms;
}
+ public List getDatabaseNames()
+ {
+ try
+ {
+ GmodDAO dao = getDAO();
+ List dbs = dao.getDbs();
+ List names = new Vector();
+ Iterator it = dbs.iterator();
+ while(it.hasNext())
+ {
+ Db db = (Db)it.next();
+ names.add(db.getName());
+ }
+ return names;
+ }
+ catch(ConnectException e)
+ {
+ // TODO Auto-generated catch block
+ e.printStackTrace();
+ }
+ catch(SQLException e)
+ {
+ // TODO Auto-generated catch block
+ e.printStackTrace();
+ }
+ return null;
+ }
+
public static Vector getCvterms(final String search_str, final String cv_name)
{
final Vector cvterm_match = new Vector();
--
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