diff --git a/lib/j2ssh/j2ssh.properties b/lib/j2ssh/j2ssh.properties index 49dc916f29bb32843ddb9de1c0409a380f9fee71..648b22d1ecdcd99f1f6741a36a73bf5a3a4b389a 100644 --- a/lib/j2ssh/j2ssh.properties +++ b/lib/j2ssh/j2ssh.properties @@ -7,6 +7,7 @@ tblastx=-I /nfs/pathsoft/prod/perl/flexi_blast.pl -tx blastn=-I /nfs/pathsoft/prod/perl/flexi_blast.pl fasta=-I /nfs/disk222/yeastpub/bio-soft/fasta/fasta33_t -B -S -q -b 100 -H -l /nfs/disk222/yeastpub/bio-soft/fasta/pubseqgbs fastx=-I /nfs/disk222/yeastpub/bio-soft/fasta/fastx33_t -B -S -q -b 40 -H -l /nfs/disk222/yeastpub/bio-soft/fasta/pubseqgbs +wdir=/nfs/pathscratch1/scratch %uniprot=%U %uniprot_archaea=%A %uniprot_bacteria=%B