From 8af42b7074003a84a5a8935462f236bc01b8c951 Mon Sep 17 00:00:00 2001
From: tjc <tjc@ee4ac58c-ac51-4696-9907-e4b3aa274f04>
Date: Tue, 26 Jun 2007 15:25:34 +0000
Subject: [PATCH] updates
git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@6148 ee4ac58c-ac51-4696-9907-e4b3aa274f04
---
artemis_sqlmap/Feature.xml | 10 ++++++++--
1 file changed, 8 insertions(+), 2 deletions(-)
diff --git a/artemis_sqlmap/Feature.xml b/artemis_sqlmap/Feature.xml
index f0adb0c3b..5b9514705 100644
--- a/artemis_sqlmap/Feature.xml
+++ b/artemis_sqlmap/Feature.xml
@@ -20,6 +20,7 @@
class="Feature" groupBy="featureId">
<result property="timeLastModified" column="timelastmodified"/>
<result property="featureId" column="id"/>
+ <result property="organism.organismId" column="organism_id"/>
<result property="featureRelationshipsForSubjectId"
resultMap="FeatureRelationship.feature_relationship" />
<!--
@@ -103,6 +104,7 @@
SELECT
timelastmodified,
f.feature_id AS id,
+ f.organism_id,
fr.object_id,
fr.type_id AS relation_type_id,
fr.rank,
@@ -248,14 +250,18 @@
</select>
- <select id="getResidueFeatures" parameterClass="java.util.Map"
+ <select id="getResidueFeatures" parameterClass="java.lang.Integer"
resultMap="select-feature-with-residues-result">
SELECT
name,
uniquename,
feature_id,
type_id
- FROM feature WHERE residues notnull AND residues NOT LIKE ''
+ FROM feature WHERE
+ <isNotNull>
+ organism_id=$value$ AND
+ </isNotNull>
+ residues notnull AND residues NOT LIKE ''
<!--
<iterate prepend="AND" property="cvTermIds" conjunction="OR" open="(" close=")">
type_id=#cvTermIds[]#
--
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