From 992f12b9e82cfe4f7e735063b14753302070d007 Mon Sep 17 00:00:00 2001
From: Ben Taylor <ben.taylor@sanger.ac.uk>
Date: Thu, 11 Jun 2015 09:50:18 +0100
Subject: [PATCH] Add Emboss to TravisCI
---
.travis.yml | 6 +++++-
1 file changed, 5 insertions(+), 1 deletion(-)
diff --git a/.travis.yml b/.travis.yml
index 69fc49c8e..33ffd302a 100644
--- a/.travis.yml
+++ b/.travis.yml
@@ -6,6 +6,10 @@ before_install:
- "export DISPLAY=:99.0"
- "sh -e /etc/init.d/xvfb start"
install:
+ - "wget ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz && tar xzfv EMBOSS-6.6.0.tar.gz"
+ - "cd EMBOSS-6.6.0 && mkdir build && ./configure --prefix $(pwd)/build && make && make install"
+ - "export EMBOSS_ROOT=$(pwd)/build && cd .."
+ - "ls -l ${EMBOSS_ROOT}/bin"
- "make"
- "cd test"
-script: ant -f build-test.xml test | tee test.log && [ -z "$(grep 'Failures:\s[^0]\|Errors:\s[^0]' test.log)" ]
+script: ant -f build-test.xml test -DEMBOSS_ROOT=$EMBOSS_ROOT | tee test.log && [ -z "$(grep 'Failures:\s[^0]\|Errors:\s[^0]' test.log)" ]
--
GitLab