diff --git a/etc/writedb_entry b/etc/writedb_entry index 36d83f3baed32b70c44cb38e99e43c2771a98bd0..2f9dde739aa2ad2abf2bc25d72c75e1ff67beefc 100755 --- a/etc/writedb_entry +++ b/etc/writedb_entry @@ -6,10 +6,26 @@ # writedb_entry -s Pf3D7_01 Pf3D7_05 Pf3D7_07 # -if [ -z "$ARTEMIS_HOME" ]; then - PRG=`readlink -f "$0"` - ARTEMIS_HOME=`dirname "$PRG"`/.. -fi +#if [ -z "$ARTEMIS_HOME" ]; then +# PRG=`readlink -f "$0"` +# echo $PRG +# ARTEMIS_HOME=`dirname "$PRG"`/.. +#fi + +PRG=$0 +progname=`basename $0` + +while [ -h "$PRG" ] ; do + ls=`ls -ld "$PRG"` + link=`expr "$ls" : '.*-> \(.*\)$'` + if expr "$link" : '.*/.*' > /dev/null; then + PRG="$link" + else + PRG="`dirname $PRG`/$link" + fi +done + +ARTEMIS_HOME=`dirname "$PRG"`/.. CLASSPATH="$ARTEMIS_HOME:$ARTEMIS_HOME/lib/biojava.jar:$ARTEMIS_HOME/lib/jemAlign.jar:$ARTEMIS_HOME/lib/jakarta-regexp-1.2.jar:$ARTEMIS_HOME/lib/macos.jar:$ARTEMIS_HOME/lib/postgresql-8.1-407.jdbc2ee.jar:$ARTEMIS_HOME/lib/chado-14-interface.jar:$CLASSPATH"