From abf49527db2664daa87794a243ec6a5c46d75d7b Mon Sep 17 00:00:00 2001
From: tjc <tjc@ee4ac58c-ac51-4696-9907-e4b3aa274f04>
Date: Wed, 27 Apr 2011 15:53:29 +0000
Subject: [PATCH] fix for variants without a format
git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@16002 ee4ac58c-ac51-4696-9907-e4b3aa274f04
---
uk/ac/sanger/artemis/components/variant/VCFRecord.java | 2 ++
1 file changed, 2 insertions(+)
diff --git a/uk/ac/sanger/artemis/components/variant/VCFRecord.java b/uk/ac/sanger/artemis/components/variant/VCFRecord.java
index 7a05c30d2..d105b7640 100644
--- a/uk/ac/sanger/artemis/components/variant/VCFRecord.java
+++ b/uk/ac/sanger/artemis/components/variant/VCFRecord.java
@@ -122,6 +122,8 @@ class VCFRecord
protected String getFormatValue(String key)
{
+ if(getFormat() == null)
+ return null;
String fmts[] = COLON_PATTERN.split(getFormat());
for(int i=0; i<fmts.length; i++)
{
--
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