From b0d468822332378191d30ed33f3ddb50c5dec501 Mon Sep 17 00:00:00 2001
From: tcarver <tjc>
Date: Thu, 15 Mar 2012 12:38:07 +0000
Subject: [PATCH] set the default flatten gene model option to true only if
writing to embl or genbank
---
uk/ac/sanger/artemis/components/EntryFileDialog.java | 4 +++-
1 file changed, 3 insertions(+), 1 deletion(-)
diff --git a/uk/ac/sanger/artemis/components/EntryFileDialog.java b/uk/ac/sanger/artemis/components/EntryFileDialog.java
index 7ae884e15..d70d48d1b 100644
--- a/uk/ac/sanger/artemis/components/EntryFileDialog.java
+++ b/uk/ac/sanger/artemis/components/EntryFileDialog.java
@@ -381,7 +381,7 @@ public class EntryFileDialog extends StickyFileChooser
}
final JCheckBox flattenGeneModel = new JCheckBox("Flatten Gene Model",
- true);
+ false);
final JCheckBox ignoreObsoleteFeatures = new JCheckBox(
"Ignore obsolete features", true);
if(((DocumentEntry)entry.getEMBLEntry()).getDocument()
@@ -406,9 +406,11 @@ public class EntryFileDialog extends StickyFileChooser
{
case DocumentEntryFactory.EMBL_FORMAT:
super.setSelectedFile(new File(".embl"));
+ flattenGeneModel.setSelected(true);
break;
case DocumentEntryFactory.GENBANK_FORMAT:
super.setSelectedFile(new File(".gbk"));
+ flattenGeneModel.setSelected(true);
break;
case DocumentEntryFactory.GFF_FORMAT:
super.setSelectedFile(new File(".gff"));
--
GitLab