From c11a27a8fae58dc48b1f39ae92c317b4b6d932f3 Mon Sep 17 00:00:00 2001
From: tjc <tjc@ee4ac58c-ac51-4696-9907-e4b3aa274f04>
Date: Tue, 22 Jun 2010 09:53:52 +0000
Subject: [PATCH] add -l option
git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@14084 ee4ac58c-ac51-4696-9907-e4b3aa274f04
---
etc/writedb_entry | 8 +++++++-
1 file changed, 7 insertions(+), 1 deletion(-)
diff --git a/etc/writedb_entry b/etc/writedb_entry
index b8d49d5a1..f636b38d4 100755
--- a/etc/writedb_entry
+++ b/etc/writedb_entry
@@ -56,10 +56,16 @@ do
let "nextID = $idx + 1";
DEFAULT_CONNECTION="-Dchado=${!nextID}"
fi
+ if [ '-l' == "${arg}" ]; then
+ let "nextID = $idx + 2";
+ eval MAPPING_PATH="${!nextID}"
+ CLASSPATH="${MAPPING_PATH}:$CLASSPATH"
+ export CLASSPATH
+ fi
let idx++
done
-
+echo $CLASSPATH
echo starting to write with flags: $DEFAULT_CONNECTION $FLAGS 1>&2
java $DEFAULT_CONNECTION $FLAGS uk.ac.sanger.artemis.io.ReadAndWriteEntry "$@"
--
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