diff --git a/uk/ac/sanger/artemis/util/DatabaseDocument.java b/uk/ac/sanger/artemis/util/DatabaseDocument.java index f8189cdcb4a021a9078a183872057512ff54d28f..ea39ef24949ae66b98f9af1e528a6dd61c55ad5d 100644 --- a/uk/ac/sanger/artemis/util/DatabaseDocument.java +++ b/uk/ac/sanger/artemis/util/DatabaseDocument.java @@ -61,6 +61,7 @@ import java.sql.*; import java.text.SimpleDateFormat; import java.io.*; import java.net.ConnectException; +import java.net.InetAddress; import java.util.Collections; import java.util.Comparator; import java.util.HashSet; @@ -163,6 +164,7 @@ public class DatabaseDocument extends Document iBatis = true; System.setProperty("chado", location); } + init(); } @@ -191,6 +193,7 @@ public class DatabaseDocument extends Document iBatis = true; System.setProperty("chado", location); } + init(); } /** @@ -225,6 +228,7 @@ public class DatabaseDocument extends Document } reset(location, schema); + init(); } /** @@ -250,6 +254,7 @@ public class DatabaseDocument extends Document iBatis = true; System.setProperty("chado", location); } + init(); } public DatabaseDocument(String location, JPasswordField pfield, @@ -267,6 +272,7 @@ public class DatabaseDocument extends Document iBatis = true; System.setProperty("chado", location); } + init(); } /** @@ -289,6 +295,7 @@ public class DatabaseDocument extends Document this.progress_listener = progress_listener; this.range = range; this.geneFeature = geneFeature; + init(); } /** @@ -310,6 +317,28 @@ public class DatabaseDocument extends Document originalDocument.getPfield(), srcFeatureId, schema, gene_builder); this.progress_listener = progress_listener; + init(); + } + + + private void init() + { + // add username & host to MDC data for logging + try + { + org.apache.log4j.MDC.put("username",getUserName()); + } + catch(NullPointerException npe) + { + org.apache.log4j.MDC.put("username",System.getProperty("user.name")); + } + + try + { + org.apache.log4j.MDC.put("host", + InetAddress.getLocalHost().getHostAddress()); + } + catch(Exception e) {} } /**