diff --git a/lib/j2ssh/j2ssh.properties b/lib/j2ssh/j2ssh.properties new file mode 100644 index 0000000000000000000000000000000000000000..e9754f73cb2843aee9757f39d40318dd3ac444aa --- /dev/null +++ b/lib/j2ssh/j2ssh.properties @@ -0,0 +1,14 @@ +port=2222 +host=localhost +bsub=bsub -q longblastq -n 1 -R 'select[blast && mem > 500] rusage[r1m=1:mem=500]' +blastp=-I /nfs/pathsoft/prod/perl/flexi_blast.pl -p +fasta=-I /nfs/disk222/yeastpub/bio-soft/fasta/fasta33_t -B -S -q -b 100 -H -l /nfs/disk222/yeastpub/bio-soft/fasta/pubseqgbs +%uniprot=%U +%uniprot_archaea=%A +%uniprot_bacteria=%B +%uniprot_eukaryota=%E +%uniprot_viruses=%V +%uniprot_rest=%R +%malaria=%M +%kineto_aa=%K +default_db=%uniprot_bacteria