From d04cc6fbd4247b3d602eec1f018d0ab3786d36b0 Mon Sep 17 00:00:00 2001
From: tjc <tjc@ee4ac58c-ac51-4696-9907-e4b3aa274f04>
Date: Wed, 17 Mar 2010 16:20:25 +0000
Subject: [PATCH] allow negative data values
git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@13517 ee4ac58c-ac51-4696-9907-e4b3aa274f04
---
uk/ac/sanger/artemis/plot/UserDataAlgorithm.java | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/uk/ac/sanger/artemis/plot/UserDataAlgorithm.java b/uk/ac/sanger/artemis/plot/UserDataAlgorithm.java
index 6cb14113b..986a37ad3 100644
--- a/uk/ac/sanger/artemis/plot/UserDataAlgorithm.java
+++ b/uk/ac/sanger/artemis/plot/UserDataAlgorithm.java
@@ -120,13 +120,13 @@ public class UserDataAlgorithm extends BaseAlgorithm
LinePushBackReader pushback_reader = new LinePushBackReader (document_reader);
String first_line = pushback_reader.readLine ();
-
- Pattern dataPattern = Pattern.compile("^\\s*([\\d\\.]+\\s*)+$");
+
+ Pattern dataPattern = Pattern.compile("^\\s*([\\d\\.-]+\\s*)+$");
Pattern blastPattern = Pattern.compile(
"^(\\S+\\t+){2}[\\d\\.]+\\t+(\\d+\\t+){7}\\S+\\t+(\\s*\\d+)$");
Pattern mspCrunchPattern = Pattern.compile(
"^\\d+\\s[\\d\\.]+(\\s\\d+){2}\\s\\D\\S+(\\s\\d+){2}\\s\\D\\S+.*");
-
+
if(dataPattern.matcher(first_line).matches())
FORMAT = BASE_PER_LINE_FORMAT;
else if(blastPattern.matcher(first_line).matches())
--
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