From f19c332edf536ce6afdf0d1fc5ba81b0378fcb29 Mon Sep 17 00:00:00 2001
From: tcarver <tjc>
Date: Thu, 9 Aug 2012 16:57:57 +0100
Subject: [PATCH] add picard libs to classpath

---
 dnaplotter | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/dnaplotter b/dnaplotter
index 06dea21b1..e64dd17d6 100755
--- a/dnaplotter
+++ b/dnaplotter
@@ -17,6 +17,10 @@ CLASSPATH=$CLASSPATH:$ARTEMIS_HOME/lib/j2ssh/commons-logging.jar:$ARTEMIS_HOME/l
 CLASSPATH=$CLASSPATH:$ARTEMIS_HOME/lib/ibatis/ibatis-2.3.4.726.jar:$ARTEMIS_HOME/lib/ibatis/:$ARTEMIS_HOME/lib/ibatis/log4j-1.2.14.jar:$ARTEMIS_HOME/lib/ibatis/cglib-nodep-2.2.jar:$ARTEMIS_HOME/lib/retrotranslator-runtime-1.1.0.jar
 export CLASSPATH
 
+# picard jars
+CLASSPATH=$ARTEMIS_HOME/lib/picard/sam.jar:$ARTEMIS_HOME/lib/picard/picard.jar:$ARTEMIS_HOME/lib/commons-net-2.2.jar:$CLASSPATH
+export CLASSPATH
+
 
 ARTEMIS_PROPERTIES="-Dartemis.environment=UNIX"
 
-- 
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