From f73904dd8385d398d7dea9455cd4969c9c449f15 Mon Sep 17 00:00:00 2001
From: tcarver <tjc>
Date: Tue, 20 Aug 2013 10:10:46 +0100
Subject: [PATCH] remove LineGroupVector
---
uk/ac/sanger/artemis/io/LineGroupVector.java | 102 ------------------
.../artemis/io/SimpleDocumentEntry.java | 6 +-
2 files changed, 3 insertions(+), 105 deletions(-)
delete mode 100644 uk/ac/sanger/artemis/io/LineGroupVector.java
diff --git a/uk/ac/sanger/artemis/io/LineGroupVector.java b/uk/ac/sanger/artemis/io/LineGroupVector.java
deleted file mode 100644
index 543179651..000000000
--- a/uk/ac/sanger/artemis/io/LineGroupVector.java
+++ /dev/null
@@ -1,102 +0,0 @@
-/* LineGroupVector.java
- *
- * created: Tue Oct 13 1998
- *
- * This file is part of Artemis
- *
- * Copyright(C) 1998,1999,2000 Genome Research Limited
- *
- * This program is free software; you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation; either version 2
- * of the License, or(at your option) any later version.
- *
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- * GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.
- *
- * $Header: //tmp/pathsoft/artemis/uk/ac/sanger/artemis/io/LineGroupVector.java,v 1.1 2004-06-09 09:49:47 tjc Exp $
- */
-
-package uk.ac.sanger.artemis.io;
-
-import java.util.Vector;
-
-/**
- * This class implements a Vector of LineGroup objects.
- *
- * @author Kim Rutherford
- * @version $Id: LineGroupVector.java,v 1.1 2004-06-09 09:49:47 tjc Exp $
- *
- */
-
-public class LineGroupVector
-{
-
- /** Storage for LineGroup objects. */
- final private Vector vector = new Vector();
-
- /**
- * Create a new vector of LineGroup objects.
- */
- public LineGroupVector()
- {
- }
-
- /**
- * Performs the same function as Vector.addElement()
- */
- public void addElement(LineGroup node)
- {
- vector.addElement(node);
- }
-
- /**
- * Performs the same function as Vector.insertElementAt()
- */
- public void insertElementAt(LineGroup node, int index)
- {
- vector.insertElementAt(node, index);
- }
-
- /**
- * Performs the same function as Vector.removeElement()
- **/
- public void removeElementAt(final int index)
- {
- vector.removeElementAt(index);
- }
-
- /**
- * Performs the same function as Vector.elementAt()
- */
- public LineGroup elementAt(int index)
- {
- return (LineGroup)vector.elementAt(index);
- }
-
- /**
- * Returns the last component of the vector.
- * @return The LineGroup at index size() - 1.
- **/
- public final LineGroup lastElement()
- {
- return (LineGroup)vector.lastElement();
- }
-
- /**
- * Performs the same function as Vector.size()
- */
- public int size()
- {
- return vector.size();
- }
-
-}
-
-
diff --git a/uk/ac/sanger/artemis/io/SimpleDocumentEntry.java b/uk/ac/sanger/artemis/io/SimpleDocumentEntry.java
index 591bb58f0..0e2f07cc8 100644
--- a/uk/ac/sanger/artemis/io/SimpleDocumentEntry.java
+++ b/uk/ac/sanger/artemis/io/SimpleDocumentEntry.java
@@ -56,7 +56,7 @@ abstract public class SimpleDocumentEntry
final private EntryInformation entry_information;
/** collection to send ReadEvents to */
- private Vector listeners = new Vector();
+ private Vector<ReadListener> listeners = new Vector<ReadListener>();
/**
* The Document object that was passed to the constructor. This should be
@@ -68,7 +68,7 @@ abstract public class SimpleDocumentEntry
* This contains all the lines(stored as LineGroup objects) from the entry
* stream that was passed to the constructor.
**/
- protected LineGroupVector line_groups = new LineGroupVector();
+ protected Vector<LineGroup> line_groups = new Vector<LineGroup>();
/**
* The DocumentEntryAutosaveThread that is started when the first call is
@@ -381,7 +381,7 @@ abstract public class SimpleDocumentEntry
throws IOException
{
- final LineGroupVector new_line_groups = new LineGroupVector();
+ final Vector<LineGroup> new_line_groups = new Vector<LineGroup>();
if(new_header != null)
{
--
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