diff --git a/artemis_sqlmap/Feature.xml b/artemis_sqlmap/Feature.xml index e30fdf10413cc4cb06e8f7883f37ecfa2036dff7..0a4cfca7f0ee6c1fdad808791d8bfd8908861bae 100644 --- a/artemis_sqlmap/Feature.xml +++ b/artemis_sqlmap/Feature.xml @@ -485,7 +485,11 @@ </dynamic> substring(residues from $endBase$ for $basesToEnd$), seqlen=$seqLen$ - WHERE feature_id=$featureId$ + WHERE + <isNotEqual property="featureId" compareValue="-1">feature_id=$featureId$</isNotEqual> + <isEqual property="featureId" compareValue="-1"> + feature_id=(SELECT feature_id FROM feature WHERE uniquename=#uniqueName#) + </isEqual> </update> <!-- INSERT --> @@ -494,6 +498,7 @@ INSERT INTO feature ( feature_id, organism_id, name, uniquename, type_id <isGreaterThan property="seqLen" compareValue="0"> , seqlen </isGreaterThan> + <isNotNull property="residues"> , residues </isNotNull> <isNotNull property="dbXRef.dbXRefId"> , dbxref_id </isNotNull> ) VALUES ( nextval('feature_feature_id_seq'), @@ -502,6 +507,7 @@ #uniqueName#, $cvTerm.cvTermId$ <isGreaterThan property="seqLen" compareValue="0"> , $seqLen$ </isGreaterThan> + <isNotNull property="residues"> , #residues# </isNotNull> <isNotNull property="dbXRef.dbXRefId"> , $dbXRef.dbXRefId$ </isNotNull> ) </insert>