From fed8d49d124ab2d2f7f6ff56dcb66876c1629ceb Mon Sep 17 00:00:00 2001
From: tcarver <tjc>
Date: Thu, 15 Aug 2013 16:07:40 +0100
Subject: [PATCH] change isFminPartial / isFmaxPartial to Start_range /
End_range
---
uk/ac/sanger/artemis/io/PublicDBDocumentEntry.java | 12 ++++++------
1 file changed, 6 insertions(+), 6 deletions(-)
diff --git a/uk/ac/sanger/artemis/io/PublicDBDocumentEntry.java b/uk/ac/sanger/artemis/io/PublicDBDocumentEntry.java
index 40b28c0eb..5a8ba07e5 100644
--- a/uk/ac/sanger/artemis/io/PublicDBDocumentEntry.java
+++ b/uk/ac/sanger/artemis/io/PublicDBDocumentEntry.java
@@ -252,10 +252,10 @@ public class PublicDBDocumentEntry extends SimpleDocumentEntry
}
else if(ntranscripts == 1)
{
- if(qualifiers.getQualifierByName("isFminPartial") != null)
- addNewQualifier(qualifiers, qualifiers.getQualifierByName("isFminPartial"));
- if(qualifiers.getQualifierByName("isFmaxPartial") != null)
- addNewQualifier(qualifiers, qualifiers.getQualifierByName("isFmaxPartial"));
+ if(qualifiers.getQualifierByName("Start_range") != null)
+ addNewQualifier(qualifiers, qualifiers.getQualifierByName("Start_range"));
+ if(qualifiers.getQualifierByName("End_range") != null)
+ addNewQualifier(qualifiers, qualifiers.getQualifierByName("End_range"));
}
combineQualifiers(qualifiers, geneQualifiers, true);
}
@@ -781,7 +781,7 @@ public class PublicDBDocumentEntry extends SimpleDocumentEntry
*/
private Location handlePartials(QualifierVector qualifiers, Location location)
{
- if(qualifiers.getQualifierByName("isFminPartial") != null)
+ if(qualifiers.getQualifierByName("Start_range") != null)
{
try
{
@@ -792,7 +792,7 @@ public class PublicDBDocumentEntry extends SimpleDocumentEntry
e.printStackTrace();
}
}
- if(qualifiers.getQualifierByName("isFmaxPartial") != null)
+ if(qualifiers.getQualifierByName("End_range") != null)
{
try
{
--
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