Skip to content
Snippets Groups Projects
Select Git revision
  • master default protected
  • gh-pages
  • build-process-upgrade-merge
  • eb-apollo-generate_names
  • BT5_travis
  • hello_github
  • v18.1.0
  • v18.0.3
  • v18.0.2
  • v18.0.1
  • v18.0.0
  • v18.0.0-RC1
  • v17.0.1
  • v17.0.0
  • v16.0.17
  • v16.0.0
  • v15.0.0
  • v14.0.0
  • v13.2.0
19 results
Compare
Name Last commit Last update
META-INF
artemis_sqlmap
docs
etc
images
lib
org/gmod/schema
test
uk/ac/sanger/artemis
.classpath
.gitignore
.project
.travis.yml
AUTHORS
ChangeLog
INSTALL
LICENSE
Makefile
README.md
act
art
art.bat
bamview
build.xml
dnaplotter
install_dependencies.sh
setenv
README.md

INTRODUCTION

Build Status

Artemis is a free genome browser and annotation tool that allows visualisation of sequence features, next generation data and the results of analyses within the context of the sequence, and also its six-frame translation. Artemis is written in Java, and is available for UNIX, Macintosh and Windows systems. It can read EMBL and GENBANK database entries or sequence in FASTA, indexed FASTA or raw format. Other sequence features can be in EMBL, GENBANK or GFF format.

ACT is a free tool for displaying pairwise comparisons between two or more DNA sequences. It can be used to identify and analyse regions of similarity and difference between genomes and to explore conservation of synteny, in the context of the entire sequences and their annotation.

DOCUMENTATION

The Artemis user manual is at: http://www.sanger.ac.uk/science/tools/artemis

The ACT user manual is at: http://www.sanger.ac.uk/science/tools/artemis-comparison-tool-act

The DNA plotter user manual is at: http://www.sanger.ac.uk/science/tools/dnaplotter

The BAM View user manual is at: http://www.sanger.ac.uk/science/tools/bamview

INSTALLATION

The installation instructions are included in the user manual.

DISTRIBUTION

Artemis may be freely distributed under the terms of the GNU Public License, and should run on any system with a recent version of Java.

For information on how to get Artemis see this web page: http://www.sanger.ac.uk/science/tools/artemis

# COPYRIGHT

Copyright (C) 1998-2018 Genome Research Limited

This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.