Newer
Older
==================================
1. change to /some/directory
2. uncompress and untar the artemis_compiled.tar.gz file
On UNIX the command is: tar xzvf artemis_compiled.tar.gz
This will create a "artemis" directory containing all the java classes. On
Unix the easiest way to run the program is to run the script called art in the
diana directory:
/some/directory/artemis/art
If all goes well you will be presented with a small window with two
menus. From the File menu you can open a flat file containing an
entry. If it reads the entry successfully a new window will open,
which shows the sequence and features for the entry.
Download and Install from GitHub
================================
Installation instructions for GitHub download
1. Download:
git clone http://github.com/sanger-pathogens/Artemis.git
2. Compile the code:
cd Artemis
make
3. Run Artemis:
./art
or ACT:
./act
Makefile targets
================
make - compile code
make jar - create Artemis (jar_build/artemis.jar) and ACT
(jar_build/act.jar) jar files.
make dist - create a tar ball of the Artemis/ACT distribution
Creating signed jar files for Artemis/ACT Java Web Start launch
===============================================================
Use 'make jar' to create jar_build/artemis.jar. See the following pages
for a description of deploying and signing jar files:
http://java.sun.com/docs/books/tutorial/deployment/webstart/deploying.html
http://java.sun.com/docs/books/tutorial/deployment/jar/signing.html
Use the Java keytool to generate a keystore (e.g. artemisstore below) file:
keytool -genkey -alias signFiles -dname "CN=$NAME, \
OU=$ORGU, O=$ORG, L=$LOC, S=$STATE, C=$CODE" \
-keypass $KEYPASS -storepass $STOREPASS -keystore artemisstore -validity $VALID
keytool -list -v -keystore artemisstore
jarsigner -keystore artemisstore -storepass $STOREPASS -keypass $KEYPASS \
-signedjar sartemis.jar artemis.jar signFiles
Running the test suite
======================
cd test
