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ID B132222 standard; DNA; PHG; 30624 BP.
XX
AC U32222; U51471; X04449; X53318;
XX
SV U32222.1
XX
DT 27-OCT-1995 (Rel. 45, Created)
DT 09-SEP-1998 (Rel. 56, Last updated, Version 6)
XX
DE Bacteriophage 186, complete sequence.
XX
KW .
XX
OS Enterobacteria phage 186
OC Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae;
OC P2-like Viruses.
XX
RN [1]
RP 20315-23876
RX MEDLINE; 87112711.
RA Kalionis B., Dodd I.B., Egan J.B.;
RT "Control of gene expression in the P2-related template coliphages. III. DNA
RT sequence of the major control region of phage 186";
RL J. Mol. Biol. 191(2):199-209(1986).
XX
RN [2]
RP 23435-24666
RX MEDLINE; 89199647.
RA Richardson H., Puspurs A., Egan J.B.;
RT "Control of gene expression in the P2-related temperate coliphage 186. VI.
RT Sequence analysis of the early lytic region";
RL J. Mol. Biol. 206(1):251-255(1989).
XX
RN [3]
RP 22430-23430
RX MEDLINE; 90317829.
RA Dodd I.B., Kalionis B., Egan J.B.;
RT "Control of gene expression in the temperate coliphage 186. VIII. Control
RT of lysis and lysogeny by a transcriptional switch involving face-to-face
RT promoters";
RL J. Mol. Biol. 214(1):27-37(1990).
XX
RN [4]
RP 12142-14054
RX MEDLINE; 95407087.
RA Xue Q., Egan J.B.;
RT "DNA sequence of tail fiber genes of coliphage 186 and evidence for a
RT common ancestor shared by dsDNA phage fiber genes";
RL Virology 212(1):128-133(1995).
XX
RN [5]
RP 14042-15941
RX MEDLINE; 95407099.
RA Xue Q., Egan J.B.;
RT "Tail sheath and tail tube genes of the temperate coliphage 186";
RL Virology 212(1):218-221(1995).
XX
RN [6]
RP 11442-18696
RA Xue Q.;
RT "Studies on the tail region of the temperate coliphage 186 genome";
RL Thesis (1993), University of Adelaide
XX
RN [7]
RP 1-20866
RX MEDLINE; 98371265.
RA Portelli R., Dodd I.B., Xue Q., Egan J.B.;
RT "The late-expressed region of the temperate coliphage 186 genome";
RL Virology 248(1):117-130(1998).
XX
RN [8]
RP 1-30624
RA Dodd I.B., Egan J.B.;
RT "Bacteriophage 186 complete genome";
RL Unpublished.
XX
RN [9]
RP 11442-18696
RA Xue Q., Egan J.B.;
RT ;
RL Submitted (25-JUL-1995) to the EMBL/GenBank/DDBJ databases.
RL Department of Biochemistry, University of Adelaide, Adelaide, SA 5005,
RL Australia
XX
RN [10]
RP 1-30624
RA Xue Q., Egan J.B.;
RT ;
RL Submitted (15-MAY-1998) to the EMBL/GenBank/DDBJ databases.
RL Department of Biochemistry, University of Adelaide, Adelaide, SA 5005,
RL Australia
XX
DR SPTREMBL; O80303; O80303.
DR SPTREMBL; O80304; O80304.
DR SPTREMBL; O80305; O80305.
DR SPTREMBL; O80306; O80306.
DR SPTREMBL; O80307; O80307.
DR SPTREMBL; O80308; O80308.
DR SPTREMBL; O80309; O80309.
DR SPTREMBL; O80310; O80310.
DR SPTREMBL; O80311; O80311.
DR SPTREMBL; O80312; O80312.
DR SPTREMBL; O80313; O80313.
DR SPTREMBL; O80314; O80314.
DR SPTREMBL; O80315; O80315.
DR SPTREMBL; O80316; O80316.
DR SPTREMBL; O80317; O80317.
DR SPTREMBL; Q01088; Q01088.
DR SPTREMBL; Q37840; Q37840.
DR SPTREMBL; Q37841; Q37841.
DR SPTREMBL; Q37842; Q37842.
DR SPTREMBL; Q37843; Q37843.
DR SPTREMBL; Q37844; Q37844.
DR SPTREMBL; Q37845; Q37845.
DR SPTREMBL; Q37846; Q37846.
DR SPTREMBL; Q37848; Q37848.
DR SPTREMBL; Q37850; Q37850.
DR SPTREMBL; Q37851; Q37851.
DR SPTREMBL; Q9T0R3; Q9T0R3.
DR SWISS-PROT; P06723; VINT_BP186.
DR SWISS-PROT; P08685; CP69_BP186.
DR SWISS-PROT; P08707; RPC1_BP186.
DR SWISS-PROT; P08711; VPB_BP186.
DR SWISS-PROT; P15236; VFIL_BP186.
DR SWISS-PROT; P21678; RPC2_BP186.
DR SWISS-PROT; P21679; VPD_BP186.
DR SWISS-PROT; P21680; VDHR_BP186.
DR SWISS-PROT; P21681; VAPL_BP186.
DR SWISS-PROT; P21682; CP79_BP186.
DR SWISS-PROT; P41059; CP80_BP186.
DR SWISS-PROT; P41060; CP81_BP186.
DR SWISS-PROT; P41061; CP83_BP186.
DR SWISS-PROT; P41062; CP84_BP186.
DR SWISS-PROT; P41063; TUM_BP186.
DR SWISS-PROT; P41064; VPA_BP186.
XX
CC On Jul 23, 1998 this sequence version replaced gi:14895 gi:15549
CC gi:1262241 gi:974436.
XX
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FH Key Location/Qualifiers
FH
FT source 1..30624
FT /db_xref="taxon:29252"
FT /organism="Enterobacteria phage 186"
FT misc_recomb 1..19
FT /evidence=EXPERIMENTAL
FT /note="cos; cohesive end; top strand cut at 5' end and
FT bottom strand cut at 3' end"
FT /organism="Enterobacteria phage 186"
FT terminator complement(164..187)
FT /evidence=NOT_EXPERIMENTAL
FT /note="tW"
FT /gene="W"
FT CDS complement(196..1218)
FT /codon_start=1
FT /db_xref="SPTREMBL:Q37851"
FT /note="Orf2; P2 Q homolog"
FT /transl_table=11
FT /gene="W"
FT /product="capsid portal protein"
FT /protein_id="AAC34146.1"
FT /translation="MSKRKPRKQVAMTASAPQKMEAFTFGEPVPVLDKRDILDYVECIS
FT NGKWYEPPVSFSGLAKSLRSAVHHSSPIYVKRNVLASTYIPHPLLSRQDFSRFALDYLV
FT FGNAFLEQRHSVTGQLIKLLASPAKYTRRGVDDSVFWFVENFTLPHEFAPDTVFHLLEP
FT DINQEIYGLPEYLSALNSAWLNESATLFRRKYYQNGAHAGYIMYVTDPAQSATDVESLR
FT EAMRNSKGLGNFKNLFFYAPNGKPDGIKIVPLSEVATKDDFFNIKKASAADLMDAHRVP
FT FQLMGGKPENIGSLGDVEKVAKVFVRNDLSPLQDRFREVNDWLGMEVIRFKEYTLDNPE
FT "
FT CDS complement(1215..1961)
FT /codon_start=1
FT /db_xref="SPTREMBL:O80303"
FT /note="similar to Orf12"
FT /transl_table=11
FT /gene="W"
FT /product="W protein"
FT /protein_id="AAC34147.1"
FT /translation="MKNNVFSQSQIQAMADILHNDSFDYQATWLRVGKLNIDRSITKSR
FT QIGATQLFSREALLDALTTGDNHVWFAHTIEHARVALMYMSNLSARVGVSLTSNGHSLQ
FT LDDGAVISFVGEESHCAALAGNVYLDEFGWFNNPLRAAKVAAGIACHKRHSLTMFTSPS
FT DNYDAFRVWNGTTRRHRPSPLINTGDSVFCTDGVWRQSVTLDAACQRGCNLFAPDEIKH
FT EYSDDDYRLLFGCDWSFAVAAGEVAA"
FT CDS complement(1961..3730)
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9T0R3"
FT /note="Orf12; P2 P homolog; contains putative
FT helix-turn-helix DNA-binding motif"
FT /transl_table=11
FT /product="terminase subunit"
FT /protein_id="AAC34148.1"
FT /translation="MTISTDTTLLHDPRRQASLLYWQGFSVPQIAEMLQVKRPTVQSWK
FT QRDGWDGIAPISRVESSLEARLIQLIAKPQKSGGDFKEIDLLGRQIERLARVNRYSQTG
FT NEADLNPNVANRNKGERKKPKKNFFSDEAIEKLEELFFDQSFEYQLQWYRAGLAHRIRD
FT ILKSRQIGATFYFSREALLRALKTGHNQIFLSASKTQAYVFREYIIQFARLVDVDLTGD
FT PIVIGNNGAKLIFLGTNSNTAQSHNGDLYVDEIFWIPNFQKLRKVASGMASQKHLRSTY
FT FSTPSTLAHGAYPFWSGELFNKGRSRIADRIEIDISHRALAGGQLCDDGQWRQIVTIED
FT ALAGGCTLFDLDQLKRENSDEDFKNLFMCEFVDDKASVFPFEELQRCMVDVMEEWEDFA
FT PFADHPFGSRPVWIGYDPSHTGDSAGCVVLAPPVVSGGKFRMLERHQWKGMDFAAQADG
FT IRKLTEKYSVEYIGIDATGLGLGVFQLVRSFYPAARGIRYTPEMKTAMVLKAKDTIRRG
FT CLEYDAGATDVTQSFMSIRKTMTSSGRSATYEASRTEEASHADIAWATMHALLNEPLSA
FT GSGIQPKSILEFN"
FT promoter complement(3753..3790)
FT /evidence=EXPERIMENTAL
FT /note="p12"
FT /function="B-dependent transcription of orf12 operon"
FT protein_bind 3798..3817
FT /evidence=EXPERIMENTAL
FT /bound_moiety="B protein"
FT /function="activation of pV and p12 promoters"
FT promoter 3828..3865
FT /evidence=EXPERIMENTAL
FT /note="pV"
FT /gene="V"
FT /function="B-dependent transcription of V operon"
FT CDS 3896..4750
FT /codon_start=1
FT /db_xref="SPTREMBL:Q01088"
FT /note="presumed capsid scaffold; P2 O homolog"
FT /transl_table=11
FT /gene="V"
FT /product="V protein"
FT /protein_id="AAC34149.1"
FT /translation="MAKKVSKFFRIGVEGDTCDGRIISASDIQEMAETYDPRVYGCRIN
FT LEHLRGLLPDGIFKRYGDVVELKAEKIDDDSALNGKWALFAKITPTDDLIAMNKAAQKV
FT YTSMEIQPNFANTGKCYLVGLAVTDDPASLGTEYLEFCRTAKHNPLQRFKAHPENVFSA
FT ATLAELEFEDVPDTVLNSLADKVKAIFSRKQVSDDARLNDVHEAVTAVSEHVQTNLTAQ
FT DKRLSDMETAFATFKQELTGKVEETSQAFSVLKTTLDKTESFSQPRRTKASGGGGDELL
FT TDC"
FT variation 3980
FT /note="Vam38; glutamine to amber"
FT /replace="t"
FT /gene="V"
FT CDS 4826..5893
FT /codon_start=1
FT /db_xref="SPTREMBL:O80304"
FT /note="T protein; P2 N homolog"
FT /transl_table=11
FT /gene="T"
FT /product="major capsid protein"
FT /protein_id="AAC34150.1"
FT /translation="MRQETRFKFNAYLTQLAKLNGISVDDVSKKFTVEPSVTQTLMNTV
FT QASSAFLQMINILPVAEMKGEKIGVGVTGTIASTTDTSGDKERQTADFTALESNKYECN
FT QINFDFHLTYKRLDLWARFQDFQRRIRDAIVQRQALDFIMAGFNGTTRADTSDRVKNPM
FT LQDVAVGWLQKYRNEAPARVMSNITDADGKVVSAVIRVGKNGDYENLDALVMDGTNTLI
FT DEIYQDDPKLVAIVGRKLLADKYFPLVNKQQENTESLAADIIISQKRIGNLPAVRVPYF
FT PANAVFVTTLENLSIYFMDESHRRSIDENPKKDRVENYESMNIDYVVEAYAAGCLLENI
FT TLGDFTAPAAPEGGE"
FT CDS 5898..6647
FT /codon_start=1
FT /db_xref="SPTREMBL:O80305"
FT /note="terminase subunit; P2 M homolog"
FT /transl_table=11
FT /gene="R"
FT /product="R protein"
FT /protein_id="AAC34151.1"
FT /translation="MTSPAQRHMMRVSASQAAQREQAPLRHATAYEQMLVKLADDRRTL
FT KNIRSNERKAEKKRELLPFYAPWVAGVLTDGRGAQDDIVMTVMLWRLDAGDIAGALEIA
FT PYALKYGLTSDHRRTTPYMLVEEVALAAQRLRDAGESVDLSWLQATIDLTDGADVPDMV
FT RARLHKVTGLTLRDAGMNAEALAQFQRAMQLDRNAGVRKEIERLERALKPKTEAAPRKT
FT TKPRTRKPATKPAAKRGRPPKAAKTAG"
FT CDS 6740..7246
FT /codon_start=1
FT /db_xref="SPTREMBL:O80306"
FT /note="capsid completion protein; P2 L homolog"
FT /transl_table=11
FT /gene="Q"
FT /product="Q protein"
FT /protein_id="AAC34152.1"
FT /translation="MTTVILNQPDEPQDVPGVVIPAPETGGAVIKNTFFFPDVDPKRVR
FT ELMRLEQTVSDARLRNAIKTGMAETNAELYDYRLRQTAAGFKQLADVPAEEIDGENVRV
FT FHYLSAVTAMATATLYERYRGVEATGKGDKKADSVETTIDDLWRDMRWSVARLQDKPRC
FT IVGQL"
FT CDS 7246..7449
FT /codon_start=1
FT /db_xref="SPTREMBL:O80307"
FT /note="Orf23; P2 X homolog; tail protein"
FT /transl_table=11
FT /protein_id="AAC34153.1"
FT /translation="MKVRSMQGDTLDTICARYYGRTEGVVETVLQANPGLSELGVILPN
FT GTEIDLPDVASSPVTKTINLWE"
FT CDS 7452..7748
FT /codon_start=1
FT /db_xref="SPTREMBL:O80308"
FT /note="Orf24; P2 Y homolog; holin"
FT /transl_table=11
FT /protein_id="AAC34154.1"
FT /translation="MTEGEKGVLSLFVIGVMIVVGKVLAGGEPITPRLFIGRMLLGGFV
FT SMVAGVVLVQFPDMSLPAVCGIGSMLGIAGYQVVEIAIQRRFKSQKGESDAGH"
FT CDS 7735..8232
FT /codon_start=1
FT /db_xref="SPTREMBL:O80309"
FT /note="endolysin; P2 K and lambda S homolog"
FT /transl_table=11
FT /gene="P"
FT /product="P protein"
FT /protein_id="AAC34155.1"
FT /translation="MPVINTHQNIAAFLDMLAYSEGTANHPLTKNRGYDVIVTGLDGRP
FT EIFTDYSDHPFAHGRPPKVFNRRGEKSTASGRYQQLYLFWPHYQKQLALPDFSPLSQDK
FT LAIQLIRERGALDDIRAGRIERAVSRCRNIWASLPGAGYGQREHGLEKLVTIWRTAGGV
FT VA"
FT variation 7999
FT /note="Pam65"
FT /replace="t"
FT /gene="P"
FT CDS 8229..8642
FT /codon_start=1
FT /db_xref="SPTREMBL:O80310"
FT /note="Orf27; P2 LysB homolog; control of lysis"
FT /transl_table=11
FT /protein_id="AAC34156.1"
FT /translation="MKVLITLLVMAVLGLLWLHHENGNLSRSFETANRVASEQKTTIGM
FT LKNQLSVAGQLARRNESAQVTLREQLAKASAEASRREQTITRLLNENEAFRRWYNAALP
FT DAVRRLHTRTACASAGDCGQRMPEGEPLPYAGK"
FT CDS 8497..8787
FT /codon_start=1
FT /db_xref="SPTREMBL:O80311"
FT /note="Orf28; homologs present in other phages, e.g. P2,
FT HP1"
FT /transl_table=11
FT /product="unknown"
FT /protein_id="AAC34157.1"
FT /translation="MKMKPFAAGITLLCLMLCVGCTPEQPAPVPVIVVNGCPRVSLCPM
FT PGSDPKTNGDLSADIRRLEGALTACALQVKTVKHCQDELDAEAQKPAQSAD"
FT CDS 8750..9217
FT /codon_start=1
FT /db_xref="SPTREMBL:O80312"
FT /note="P2 R homolog; tail completion protein"
FT /transl_table=11
FT /gene="N"
FT /product="N protein"
FT /protein_id="AAC34158.1"
FT /translation="MQKHKSLRKALINAVPQLRNNPDMLRLFADNGHTDSRLASSLSFE
FT KVYVLNVVVTDFTGDLDLIFVPVQAWLREHQPDIMTTDDGREKGFTWIIDINNDDSLDI
FT SISLRLTERTLVKEVGGALHVSYAPEPPLPELVKRPVAMYANGELVSQWDE"
FT variation 8877
FT /note="Nam47"
FT /replace="a"
FT /gene="N"
FT CDS 9210..9659
FT /codon_start=1
FT /db_xref="SPTREMBL:O80313"
FT /note="P2 S homolog; tail completion protein"
FT /transl_table=11
FT /gene="O"
FT /product="O protein"
FT /protein_id="AAC34159.1"
FT /translation="MSELTALQERLAGLIASLSPAARRKMAAEIAKKLRTSQQQRIKRQ
FT QAPDGTPYAARKRQPVRSKKGRIKREMFAKLRTSRFMKAKGSDSAAVVEFTGKVQRMAR
FT VHQYGLKDRPNRNSRDVQYEARPLLGFTRDDEQMIEDVIISHLGK"
FT variation 9324
FT /note="Oam61"
FT /replace="t"
FT /gene="O"
FT variation 9345
FT /note="Oam62"
FT /replace="t"
FT /gene="O"
FT CDS 9729..10370
FT /codon_start=1
FT /db_xref="SPTREMBL:O80314"
FT /note="Orf32; P2 V homolog; baseplate protein"
FT /transl_table=11
FT /protein_id="AAC34160.1"
FT /translation="MNTLSTIQELARAIRNLIRSGVVTEVDTVQGLCRVQSGGIQTTWL
FT NWLTTRAGRSRTWWAPSLGEQVLLLAIGGELDTAFVLPGIFSDDNPAPSASADAWHVVF
FT PDGAVIEYEPETSALTVRGIKTADVTASESITATVPVVLVKAETRITLDTPEVVCTNKL
FT TTATLEVQKGGEMRGDIVHNGGTFKSNGVQLDDHGHGGVQRGGAWTEDTK"
FT CDS 10367..10714
FT /codon_start=1
FT /db_xref="SPTREMBL:O80315"
FT /note="P2 W homolog; putative baseplate protein"
FT /transl_table=11
FT /gene="M"
FT /product="M protein"
FT /protein_id="AAC34161.1"
FT /translation="MTARYMGMNRNTGLGISDTEHISQSMRDILLTPVGSRVMRREYGS
FT LLSALIDMPQNPALRLQIMVACYSAIQKWEPRIRLTSISFETGDAGEMYVDITGMRTDT
FT GASVSTTVSLS"
FT CDS 10721..11629
FT /codon_start=1
FT /db_xref="SPTREMBL:Q37840"
FT /note="P2 J homolog; baseplate or base of tail fibre"
FT /transl_table=11
FT /gene="L"
FT /protein_id="AAC34162.1"
FT /translation="MATVDLSLLPVPDVVEELDFETILAERIATLISLYPEDQQEAVAR
FT TLALESEPIVKLLQENAYREVIWRQRVNEAARAGMLAYARDSDLDNLGANFNVERLVVR
FT PADDTTIPPTPAEMELDADFRLRIQQAFEGMSVAGSTGAYEFHGRSADGRVADISVISP
FT SPACVTISVLSRENNGAASDELQSIVRNALNAEDVRPVADRVTVQSAQIIDYQIRATLF
FT VYPGPENEPIRAAAEAKLKAYISAQHRLGRDIRLSAIYAALHVEGVQRVELAAPVADIV
FT LDKTQASFCTDYQIVIGGSDE"
FT variation 10818
FT /note="Lam21"
FT /replace="a"
FT /gene="L"
FT CDS 11622..12152
FT /codon_start=1
FT /db_xref="SPTREMBL:Q37841"
FT /note="Orf38; P2 I homolog; tail protein"
FT /transl_table=11
FT /protein_id="AAC34163.1"
FT /translation="MSDVRLLPVGSSPLEVAAARACADIENTPVPLRRLWSPDTCPANL
FT LPWLAWAFSVDRWDENWPEKTKRDVIRSAYFTHCHKGTIGAVRRVIEPLGYIINVTEWW
FT ETGDPAGTFRLDIGVLESGITEEMYLEMERLIADAKPASRHLIGLNIIQDIPGYMYTGG
FT VSCDGDIITVYPG"
FT CDS 12163..13551
FT /codon_start=1
FT /db_xref="SPTREMBL:Q37842"
FT /note="similar to P2 tail fiber protein H, PIR Accession
FT Number B42291"
FT /transl_table=11
FT /gene="K"
FT /protein_id="AAC34164.1"
FT /translation="MSTKFKTIITTAGAEKLAAATVPGGKKVNITVMAVGDGGGKLPVP
FT DAGQVQLVNEVWRHALNKISQDNRNSNYIVAELVIPPEVGGFWMRELGLYDDEGTLIAV
FT ANMAESYKPELAEGSGRAQTCRMVIIVSSIASVELSIDSTMVMATQEYVDDRIAEHEKS
FT RRHPDATLKEKGFTQLSSATDSASEVLAATPKAVKAAYDLANAKYTAQDASTAQKGIVR
FT LSSAADSTSEAEAATPKAVKIAMDNANARLAKDRNGADIPNPPLFVQNIGLKPTVDKAA
FT NAVDKNGDTMNGNLTLKGDYRLSFIIQNEDGSIRAYIFKDKGGDGIRISNGDDGGGDFV
FT FGKNGQFYCPDIMHVGNTIVWGDGNIEGARWGGLLSDWLTAQLVARDNNINLRAPYEWV
FT NQNFVNRAQRGAQASMTMDGGLVEAPWGCFLTGGNGNEGNQVGVALYRPLQILRNNTWV
FT TIEN"
FT misc_recomb 12962..12987
FT /note="Mu-like inversion crossover site"
FT /organism="Enterobacteria phage 186"
FT /gene="K"
FT CDS 13554..14054
FT /codon_start=1
FT /db_xref="SPTREMBL:Q37843"
FT /note="unnamed protein product"
FT /transl_table=11
FT /protein_id="AAC34165.1"
FT /translation="MKLINLQRYILMNYFLGDGIQYFIDATGKDWYKSLPKFTKKYSLA
FT IENDTGVIRSISEDASRLYPGGLTVVDVDSIPAGCDIFGGWVFDGEKVIPREYTLAEQQ
FT RQSDEKKKTLLAEAEATISTLERAVRLGMATGEEIRRLEAWERYSVLVSRVKQSDDWPQ
FT KPE"
FT terminator 14058..14081
FT /evidence=NOT_EXPERIMENTAL
FT /note="t45"
FT protein_bind 14091..14110
FT /evidence=NOT_EXPERIMENTAL
FT /bound_moiety="B protein"
FT /function="activation of transcription from pJ"
FT promoter 14122..14159
FT /evidence=EXPERIMENTAL
FT /note="pJ"
FT /function="B-dependent transcription of J operon"
FT promoter 14159
FT /note="initiation point of late promoter pJ"
FT CDS 14183..15361
FT /codon_start=1
FT /db_xref="SPTREMBL:Q37844"
FT /note="similar to P2 tail sheath protein FI, Swiss-Prot
FT Accession Number P22501"
FT /transl_table=11
FT /gene="J"
FT /protein_id="AAC34166.1"
FT /translation="MSDFHHGTKVIEINDGTRVISTVATAIVGMVWTASDADAETFPLN
FT EPVLITNVQSAIAKAGKKGTLSASLQAIADQSKPVTVVVRVAEGTGDDAEAQTTSNIIG
FT GTDENGKYTGIKALLTAEAVTGVKPRILGVPGLDTQEVATALASVCISLRAFGYVSAWG
FT CKTISEAMAYRENFSQRELMVIWPDFLAWDTTANATATAYATARALGLRAYIDQTIGWH
FT KTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTLVRKDGFRFWGNRTCSDDPL
FT FLFENYTRTAQVLADTMAEAHMWAVDKPITASLIRDIVDGINAKFRELKSNGYIVDGEC
FT WFDEESNDKETLKAGKLYIDYDYTPVPPLESLTLRQRITDKYLVNLAESVNS"
FT CDS 15377..15898
FT /codon_start=1
FT /db_xref="SPTREMBL:Q37845"
FT /note="similar to P2 tail tube protein FII, Swiss-Prot
FT Accession Number P22502"
FT /transl_table=11
FT /gene="I"
FT /protein_id="AAC34167.1"
FT /translation="MALPRKLKYLNMFNDGLSYMGVVESVTLPKLTRKLENYRGGGMNG
FT AAAIDLGLDDDALTVEWSVGGLPDVALWAQYAAPGADAVPLRFAGSYQRDDTGEIVAVE
FT VVMRGRHKEIDGGENKQGENTSTKLSTVCTYYRLTIDGSDIIEIDTVNMVEKVNGVDRL
FT EQHRRAIGLL"
FT terminator 15906..15932
FT /note="tI; partial terminator of pJ transcript"
FT CDS 15960..16295
FT /codon_start=1
FT /db_xref="SPTREMBL:Q37846"
FT /note="Orf51; P2 E homolog; tail protein"
FT /transl_table=11
FT /gene="H"
FT /protein_id="AAC34168.1"
FT /translation="MAKAPRKTPEFIDTAGNEIDTVNPNVVTLDKPIKRAGQTIEKVTL
FT IEPNAGTLRGVSLAAVAQSEVDALIKVLPRMTYPALTTQELTAMNLPDMLSLAAKVIGF
FT LSPASAE"
FT CDS <16271..16447
FT /codon_start=1
FT /db_xref="SPTREMBL:O80316"
FT /note="Orf52; tail protein; probably produced by a
FT translational frameshift from orf51 into orf52"
FT /transl_table=11
FT /gene="H"
FT /protein_id="AAC34169.1"
FT /translation="FVTGFGGIDFPPGLSTDDLMADIAVIFHWPPSELYSLSLTELITW
FT REKALQRSGNHNE"
FT variation 16314
FT /note="Ham50"
FT /replace="a"
FT /gene="H"
FT variation 16421
FT /note="Ham56"
FT /replace="t"
FT /gene="H"
FT CDS 16440..18878
FT /codon_start=1
FT /db_xref="SPTREMBL:Q37848"
FT /note="P2 T homolog; tail protein"
FT /transl_table=11
FT /gene="G"
FT /product="G protein"
FT /protein_id="AAC34170.1"
FT /translation="MSNNLRLEVLLKAVDQATRPLKSIQTASKSLSGDIRDTQKGLRDL
FT NGQASKIDGFRKASAQLAVTSQALDKAKREAGELAVQFKNTTNPTRAQAQALEAARRAA
FT SELQTKYNSLRTSVQRQRSELMQAGINTRTLSADERRLKTSISETTAHVNRQREALARV
FT SAQQAKLSRVKERYKSGKELAGNMAAAGAAGSVSRHGTMAGVKLLMPGYDFTQKNSELQ
FT AVLGVDKQSPEMQALRKQARHVGDNTAASADDAASAQIIIAKSGGDAAAIQARRRVTLN
FT MALSNRRTMEENAALLTGMKSAFQLSNDKIAHIGDVLSMTMNKTAADFDGLSDALTYAA
FT PVAKNAGVSIEQTAAMVGALHDAKITGSMAGTGSRAILSRLQLPPEKAFEAIKELGVKT
FT SDSKGNTRPIFSILKEMQRSFEKNNLGTSQRGEYMKTIFGEEASSAAAVLMEAASSGKL
FT DRLTAAFKASDGKTEELVKVMQDNLGGDFKEFQSAYEAVGTDLFDQQEGSLRKLTQTAT
FT QYVLKLDGWIQKNKGLATTIGIIAGGALALIGIIGGIGLVAWPVVMGINAIIAAAGVLG
FT TVFTVTGSAIVTALGAITWPIVAVGAAIVAGALLIRKYWEPISAFFSGVIEGIMSAFAP
FT VAEMFAPLAPIFDGLGEKLRGVWQWFKDLIAPVKATQETLDSCKNVGVIFGQALASALM
FT RPLNVFNKLRSGVDWLLEKLGIINKESDNLDQTAAKTNAATQGNSYIPATSTYGGYQAY
FT QPVTAPAGRSYIDQSKSEYKITLPGGAAPGHQLDRQLRDTLEQIEREKRARQRASMSHD
FT "
FT CDS 18891..19376
FT /codon_start=1
FT /db_xref="SPTREMBL:O80317"
FT /note="P2 U homolog; tail protein"
FT /transl_table=11
FT /gene="F"
FT /product="F protein"
FT /protein_id="AAC34171.1"
FT /translation="MMLALGMFVFERRTLPYQSMQHSKDYRWASNDRVGKPPAYQFLGE
FT GETSIQLAGTLYPAITGGWISLKAVEVMANEGRAWPLIEGTGNILGMYIVDKVSTTHAE
FT FFSDGAARKIDFTLSLKRVDESLTAMFGDLNKQASELLGSAGNLTDKLQSALGGLTA"
FT CDS 19373..20542
FT /codon_start=1
FT /db_xref="SWISS-PROT:P21679"
FT /note="P2 D homolog; tail protein"
FT /transl_table=11
FT /gene="D"
FT /product="D protein"
FT /protein_id="AAC34172.1"
FT /translation="MITGMTIDAGTSLAPAFMLTLNSQDITSNFSDRLISLTMTDNRGF
FT EADQLDIELDDTDGKVELPLRGAVLTLWLGWQGSALLNKGDFTVDEIEHRGAPDILTIR
FT ARSADFRGTLNSRREESWHDTTIGELVSTIAKRNKLTASVADSLKKIPVPHIDQSQESD
FT AVFLTRLADRNGATVSVKAGKLLFLKAGSAMTASGKPVPQMTLTRNDGDRHQFAIADRG
FT AYTGVTAKWLHTKDPKPQKQKVTLKRKPKEKHLRALEHPKAKPVSKKTKAKKEPEAREG
FT EYMAGEADNVLALTTVYASKAQAMRAAQAKWDKLQRGVAEFSITLALGRADLFPETPVR
FT VSGFKRVIDEQAWLISKVTHNLNNSGFTTGLELEVKLSDVEYNAESDDE"
FT variation 20378
FT /note="Dam23"
FT /replace="t"
FT /gene="D"
FT variation 20492
FT /note="Dam14"
FT /replace="t"
FT /gene="D"
FT protein_bind 20548..20596
FT /evidence=EXPERIMENTAL
FT /note="two CI binding sites for repression of pB"
FT /gene="B"
FT /bound_moiety="CI"
571
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583
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607
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611
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613
614
FT promoter 20549..20584
FT /evidence=EXPERIMENTAL
FT /note="pB; repressed by CI"
FT /gene="B"
FT /function="transcription of B gene"
FT -10_signal 20572..20577
FT /gene="B"
FT CDS 20609..20827
FT /codon_start=1
FT /db_xref="SWISS-PROT:P08711"
FT /note="C4 Zn finger protein; P2 Ogr and P4 Delta homolog"
FT /transl_table=11
FT /gene="B"
FT /function="activate late gene promoters"
FT /product="B protein"
FT /protein_id="AAC34173.1"
FT /translation="MFHCPKCHHAAHARTSRYLTENTKERYHQCQNINCSCTFMTMETI
FT ERFIVTPGAIDPAPPHPTVGGQRPLWL"
FT variation 20690
FT /note="Bam57"
FT /replace="t"
FT /gene="B"
FT variation 20744
FT /note="Bam17"
FT /replace="t"
FT /gene="B"
FT terminator 20845..20866
FT /note="tB; termination of transcription from pB and late
FT promoter"
FT protein_bind 20889..21147
FT /note="predicted Int arm-type recognition sequences;
FT consensus = YAYCGCCAYTY; 3 sites to left of attP and 2
FT sites to right"
FT /bound_moiety="Int"
FT terminator complement(20930..20957)
FT /note="predicted terminator of lysogenic operon"
FT protein_bind 20959..20985
FT /evidence=EXPERIMENTAL
FT /note="IHF DNase I footprint location"
FT /bound_moiety="IHF"
FT tRNA 20985..21030
FT /note="truncated"
FT /product="tRNA-Ile"
FT misc_feature 20995..21030
FT /note="in common with attB in Escherichia coli, which is
FT in the 3' end of ileY"
617
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619
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747
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751
FT misc_feature 21023..21029
FT /note="attP; predicted crossover region with attB"
FT variation 21030..22865
FT /note="del1 deletion"
FT protein_bind 21057..21086
FT /evidence=EXPERIMENTAL
FT /note="IHF DNase I footprint location"
FT /bound_moiety="IHF"
FT protein_bind 21075..21121
FT /note="five binding sites for Apl excisionase at attP"
FT /bound_moiety="Apl"
FT CDS complement(21157..21408)
FT /codon_start=1
FT /db_xref="SWISS-PROT:P08685"
FT /note="Orf69"
FT /transl_table=11
FT /protein_id="AAC34174.1"
FT /translation="MSVRLAPDGTYVYGQPMLAPNGTYVGGGAPRLAPDGTYVGGVPRL
FT APNGSYVAGRPTLAPDGTYVGGRYHLAPDGTYVGDGSE"
FT CDS complement(21423..22433)
FT /codon_start=1
FT /db_xref="SWISS-PROT:P06723"
FT /note="integrase"
FT /transl_table=11
FT /gene="int"
FT /product="Int"
FT /protein_id="AAC34175.1"
FT /translation="MTVRKNPAGGWICELYPNGAKGKRIRKKFATKGEALAFEQYTVQN
FT PWQEEKEDRRTLKELVDSWYSAHGITLKDGLKRQLAMHHAFECMGEPLARDFDAQMFSR
FT YREKRLKGEYARSNRVKEVSPRTLNLELAYFRAVFNELNRLGEWKGENPLKNMRPFRTE
FT EMEMTWLTHDQISQLLGECNRHDHPDLETVVRICLATGARWSEAESLRKSQLAKYKITY
FT TNTKGRKNRTVPISKELYESLPDDKKGRLFSDCYGAFRSALERTGIELPAGQLTHVLRH
FT TFASHFMMNGGNILVLQRVLGHTDIKMTMRYAHFAPDHLEDAVKLNPLVHITNSK"
FT CDS complement(22433..23011)
FT /codon_start=1
FT /db_xref="SWISS-PROT:P08707"
FT /note="immunity repressor; DNA-binding protein; has
FT positive and negative autoregulation by control of pL"
FT /transl_table=11
FT /gene="cI"
FT /function="maintenance of lysogeny; repress pB and pR"
FT /product="CI repressor"
FT /protein_id="AAC34176.1"
FT /translation="MRIDSLGWSNVDVLDRICEAYGFSQKIQLANHFDIASSSLSNRYT
FT RGAISYDFAAHCALETGANLQWLLTGEGEAFVNNRESSDAKRIEGFTLSEEILKSDKQL
FT SVDAQFFTKPLTDGMAIRSEGKIYFVDKQASLSDGLWLVDIEGAISIRELTKLPGRKLH
FT VAGGKVPFECGIDDIKTLGRVVGVYSEVN"
FT variation 22684..22685
FT /note="cI10"
FT /replace="g"
FT /gene="cI"
FT protein_bind 22726..22742
FT /note="FL; unknown function"
FT /gene="cI"
FT /bound_moiety="CI"
FT variation 22989
FT /note="cIam461"
FT /replace="t"
FT /gene="cI"
FT protein_bind 23011..23067
FT /note="locus of vir mutations; 3 binding sites for CI
FT repressor"
FT /bound_moiety="CI"
FT /function="repression of pR"
FT -35_signal 23026..23031
FT /note="pR"
FT promoter 23026..23063
FT /evidence=EXPERIMENTAL
FT /note="pR; repressed by CI and Apl"
FT /function="transcription of early lytic operon"
FT -10_signal 23049..23054
FT /note="pR"
FT protein_bind 23056..23123
FT /note="7 binding sites for Apl; locus of goa mutations"
FT /bound_moiety="Apl"
FT /function="repression of pR and pL"
FT promoter complement(23125..23159)
FT /evidence=EXPERIMENTAL
FT /note="pL; repressed by Apl; inhibited by convergent pR
FT promoter; activated by CI repression of pR"
FT /function="transcription of lysogenic operon"
FT -10_signal complement(23131..23136)
FT /note="pL"
FT CDS 23141..23404
FT /codon_start=1
FT /db_xref="SWISS-PROT:P21681"
FT /note="contains putative helix-turn-helix DNA binding
FT motif"
FT /transl_table=11
FT /gene="apl"
FT /function="excisionase; binds to attL"
FT /function="repressor: binds between and represses pR and
FT pL"
FT /function="appears to assist derepression during prophage
FT induction"
FT /product="Apl"
FT /protein_id="AAC34177.1"
FT /translation="MASEIAIIKVPAPIVTLQQFAELEGVSERTAYRWTTGDNPCVPIE
FT PRTIRKGCKKAGGPIRIYYARWKEEQLRKALGHSRFQLVIGA"
FT -35_signal complement(23154..23159)
FT /note="pL"
FT /gene="apl"
FT variation 23205..23219
FT /note="apl11 deletion"
FT /gene="apl"
FT variation 23236
FT /note="aplam"
FT /replace="g"
FT /gene="apl"
FT promoter complement(23400..23462)
FT /evidence=EXPERIMENTAL
FT /note="pE; activated by CII, allowing transcription of
FT lysogenic operon"
FT /function="transcript for establishment of lysogeny"
FT protein_bind 23404..23420
FT /note="FR"
FT /bound_moiety="CI"
FT /function="probably responsible for CI repression of pE
FT promoter"
FT CDS 23435..23944
FT /codon_start=1
FT /db_xref="SWISS-PROT:P21678"
FT /note="DNA binding protein; has putative helix-turn-helix
FT motif"
FT /transl_table=11
FT /gene="cII"
FT /function="required for establishment of lysogeny"
FT /function="activates pE, alternative lysogenic operon
FT promoter"
FT /product="CII"
FT /protein_id="AAC34178.1"
FT /translation="MFDFQVSKHPHYDEACRAFAQRHNMAKLAERAGMNVQTLRNKLNP
FT EQPHQFTPPELWLLTDLTEDSTLVDGFLAQIHCLPCVPVNELAKDKLQSYVMRAMSELG
FT ELASGAVSDERLTTARKHNMIESVNSGIRMLSLSALALHARLQTNPAMSSVVDTMSGIG
FT ASFGLI"
FT protein_bind 23435..23462
FT /gene="cII"
FT /bound_moiety="CII"
FT /function="activate pE"
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757
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785
786
787
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789
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793
FT variation 23440
FT /note="prevents CII binding to pE; cIV476"
FT /replace="a"
FT /gene="cII"
FT variation 23657
FT /note="cIIam475"
FT /replace="t"
FT /gene="cII"
FT CDS 23952..24179
FT /codon_start=1
FT /db_xref="SWISS-PROT:P15236"
FT /evidence=EXPERIMENTAL
FT /note="overexpression blocks cell division"
FT /transl_table=11
FT /gene="fil"
FT /product="Fil"
FT /protein_id="AAC34179.1"
FT /translation="MLKSEPSFASLLVKQSPGMHYGHGWIAGKDGKRWHPCRSQSELLK
FT GLKTKSPKSSGFLIIRIVHFVIKGVKHVTR"
FT variation 24112
FT /note="CP77am; filam"
FT /replace="a"
FT /gene="fil"
FT CDS 24166..24366
FT /codon_start=1
FT /db_xref="SWISS-PROT:P21680"
FT /transl_table=11
FT /gene="dhr"
FT /function="inhibits host DNA replication"
FT /product="Dhr"
FT /protein_id="AAC34180.1"
FT /translation="MSRDELRIVLGAMIPNMEEGFEIKTRDGAILRVDPEWECCKEFKD
FT GLKAEIIKQLKSKPAVVFGYS"
FT variation 24194
FT /note="CP78am; dhram"
FT /replace="a"
FT /gene="dhr"
FT terminator 24384..24412
FT /note="tR1; one of a number of transcription terminators
FT in this region that are anti-terminated during early lytic
796
797
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FT development by an unknown mechanism"
FT CDS 24433..24666
FT /codon_start=1
FT /db_xref="SWISS-PROT:P21682"
FT /note="unknown function; not essential"
FT /transl_table=11
FT /product="Orf79"
FT /protein_id="AAC34181.1"
FT /translation="MSRTIYLSTPSGAGDHLLESLFKEAKKEERKDRRLAVSIRLEDLA
FT VHITNSDMTGKEAAELLRREATRFENESQELH"
FT CDS 24666..24893
FT /codon_start=1
FT /db_xref="SWISS-PROT:P41059"
FT /note="unknown function; not essential"
FT /transl_table=11
FT /product="Orf80"
FT /protein_id="AAC34182.1"
FT /translation="MADAMDLAQLREQEDRERHISNARSRRHEVSAFICEECDAPIPEA
FT RRRAIPGVQCCVTCQEILELKSKHYNGGAL"
FT CDS 24890..25474
FT /codon_start=1
FT /db_xref="SWISS-PROT:P41060"
FT /note="unknown function; not essential"
FT /transl_table=11
FT /product="Orf81"
FT /protein_id="AAC34183.1"
FT /translation="MSITNATISQRAKKWLEDDRIFIDTETTGLGDDAEIVEICLIDSA
FT GFIMLNTLVKPTKPIPAEATAIHGITDEMVMYAPTWKDIHGAVASLFFEYGFVIYNADY
FT DTRLIYQTAKLYGLENDGFCYFLNERSACAMMLYAEYRGEPGRFKGYKWHKLVDAAAHE
FT GVSVEGKAHRALADCRMTLGIIDALAKGGAA"
FT CDS 25471..25746
FT /codon_start=1
FT /db_xref="SWISS-PROT:P41061"
FT /note="unknown function; not essential"
FT /transl_table=11
FT /product="Orf83"
FT /protein_id="AAC34184.1"
FT /translation="MSIRIEIGDKWVITSDQYQFILNEKKVVKTGNKAGEEWLDTIGYY
FT PKINQLISGLVHHHIHTAMIISLSAMAEEIEKLSFICEEAFKAVKK"
FT CDS 25743..26747
FT /codon_start=1
FT /db_xref="SWISS-PROT:P41062"
FT /note="unknown function; not essential. translation to end
FT of orf84 appears necessary for translation of A protein"
FT /transl_table=11
FT /product="Orf84"
FT /protein_id="AAC34185.1"
FT /translation="MIDSRCFAESTINIVSVSGGKDSLAQWILAVENDVPRTTVFADTG
FT HEHSQTMEYLDYLESRLGPVIRVKADFTRRIEGKRKFIAEKWPVSLVEECGMSHEQAAE
FT RIAKALEILKPTGNPFLDLCMWKGRFPSTKARFCSLELKHDSVRDKIVLPALEKYDEVI
FT LWQGVRAQESPARAALPMWEEDADNTPGLHVYRPILNWTHEDVFALAKRHGIKPNPLYQ
FT QGCSRVGCMPCIHARKSELAEIFARWPEEIARVAEWERLVAACSRRGNSTFFPSTHDPR
FT RAEKRIEVVTVEEYGIASYRDWAMTTRGGSQYDLLAATNDKTVCSSVYAGVCE"
FT variation 25803
FT /note="am43"
FT /replace="t"
FT /phenotype="lethal due to polarity on A"
FT variation 25845..26288
FT /note="del444"
FT /replace=""
FT variation 26460
FT /note="am11"
FT /replace="t"
FT /phenotype="lethal due to polarity on A"
FT CDS 26744..28828
FT /codon_start=1
FT /db_xref="SWISS-PROT:P41064"
FT /note="rolling circle replicase; putative endonuclease;
FT similar to P2 A protein"
FT /transl_table=11
FT /gene="A"
FT /product="A protein"
FT /protein_id="AAC34186.1"
FT /translation="MTGVVYAFPWNAPRSAIASSYLTYDQQHRRDRMFAALLHARKVLF
FT LQPECVRFDVYRTAAVLEQNQGSQRANAFLISFCKKALPRLELVAKKYECSGINSNVSA
FT AVFDGHFDTQLMQYLASRMVNMVARFNRLPDMSRADIDLLAADIANFIRAELADIDDTG
FT FSELKTLYTWYMRAGFISLQFNVTPPKWERVTKKYFCEDEIAPAVMRMFNEVWWRGRLR
FT RIAAAWREHLQIAVGNVSKKRHAYASKNCVTDWREQKRRTREFLKGLDLEDEEGNRISL
FT IEKYDGSVANPAIRRCELMARIRGFENICNELGYVGEFYTLTAPSKYHATTKAGYRNSK
FT WNGASPSDTQSYLTGLWARIRAKLHREEIRIFGIRVAEPHHDGTPHWHMLMFMLPEDVE
FT RVRLIIRDYAWEEDHYELRSDKAKKARFHAEAIDPEKGSATGYVAKYISKNIDGYALDG
FT ETDDESGELLKETAPAVSAWAARWHIRQFQFIGGAPVTVYRELRRMADPETARALSVEF
FT AAVHDAAHYGRWADYVNAQGGPFVRRDDLQVRTLYEPRTEFNQYGEETVCIKGVYDASI
FT GAGSPILTRLTQWKIVPKRAVDLAVDVKGASAPSRSSVNNCTGSESDPPILDLTKPLSR
FT RERRELTNRLRKKKPTTRRKFIHGTDKQNVAITKTIDEIHSDNRHHNQPGRSPAPDGRW
FT "
FT terminator 26829..26856
FT /note="tM1; expected terminator for lytic transcripts in
FT absence of translation of A gene"
FT /gene="A"
FT variation 27542
FT /note="Aam24"
FT /replace="t"
FT /gene="A"
FT rep_origin 28576
FT /note="located by similarity with P2; consistent with
FT electron microscopy mapping"
FT /gene="A"
FT -35_signal 29020..29025
FT /note="p95"
FT promoter 29020..29056
FT /evidence=EXPERIMENTAL
FT /note="p95"
FT /function="SOS-dependent transcription of SOS operon"
FT -10_signal 29044..29049
FT /note="p95"
FT protein_bind 29044..29063
FT /note="putative"
FT /bound_moiety="LexA"
FT variation 29053..29055
FT /note="cIII"
FT /replace="tt"
FT variation 29074
FT /note="tum9"
FT /replace="a"
FT CDS 29082..29522
FT /codon_start=1
FT /db_xref="SWISS-PROT:P41063"
FT /note="expression repressed by LexA"
FT /transl_table=11
FT /gene="tum"
FT /function="inhibits CI DNA binding"
FT /product="Tum"
FT /protein_id="AAC34187.1"
FT /translation="MDRELNEHVMIERVEMIARLTAEGTCQERDREIALNLIAEIARGN
FT LMKNNNFSVVFSAPPVGETFAKEGKVKVNITLDKDQKIGQPVIDAFQCELTKRIQSVFP
FT STRVTVKKGSMTGVELMGFDKDSDREALDSILQEVWEDESWR"
FT CDS 29109..29522
FT /codon_start=1
FT /db_xref="SWISS-PROT:P41063"
FT /evidence=EXPERIMENTAL
FT /transl_table=11
FT /gene="tum"
FT /function="modulates SOS induction"
FT /product="truncated Tum95.2"
FT /protein_id="AAC34188.1"
FT /translation="MIERVEMIARLTAEGTCQERDREIALNLIAEIARGNLMKNNNFSV
FT VFSAPPVGETFAKEGKVKVNITLDKDQKIGQPVIDAFQCELTKRIQSVFPSTRVTVKKG
FT SMTGVELMGFDKDSDREALDSILQEVWEDESWR"
FT variation 29115
FT /note="tum16"
FT /replace="a"
FT /gene="tum"
FT variation 29182
FT /note="tum13"
FT /replace="t"
FT /gene="tum"
FT variation 29199
FT /note="tum17"
FT /replace="a"
FT /gene="tum"
FT CDS 29220..29522
FT /codon_start=1
FT /db_xref="SWISS-PROT:P41063"
FT /evidence=EXPERIMENTAL
FT /transl_table=11
FT /gene="tum"
FT /function="modulates SOS induction"
FT /product="truncated Tum95.4"
FT /protein_id="AAC34189.1"
FT /translation="MKNNNFSVVFSAPPVGETFAKEGKVKVNITLDKDQKIGQPVIDAF
FT QCELTKRIQSVFPSTRVTVKKGSMTGVELMGFDKDSDREALDSILQEVWEDESWR"
FT variation 29245..29251
FT /note="tum14"
FT /replace="ttttt"
FT /gene="tum"
FT CDS 29292..29522
FT /codon_start=1
FT /db_xref="SWISS-PROT:P41063"
FT /evidence=EXPERIMENTAL
FT /note="truncated Tum - modulates SOS induction of 186
FT prophage. GTG start codon."
FT /transl_table=11
FT /gene="tum"
FT /product="bacteriophage 186 Tum95.5"
FT /protein_id="AAC34190.1"
FT /translation="MKVNITLDKDQKIGQPVIDAFQCELTKRIQSVFPSTRVTVKKGSM
FT TGVELMGFDKDSDREALDSILQEVWEDESWR"
FT variation 29391
FT /note="tum2"
FT /replace="t"
FT /gene="tum"
FT terminator 29545..29576
FT /evidence=EXPERIMENTAL
FT /note="t95a; partial termination of p95 transcript"
FT CDS 29604..30335
FT /codon_start=1
FT /db_xref="SPTREMBL:Q37850"
FT /note="expression from plasmid blocks 186 infection"
FT /transl_table=11
FT /gene="orf97"
FT /product="Orf97"
FT /protein_id="AAC34191.1"
FT /translation="MDTVIAFLSLALFIAFIVGLIKPSLVRMPSRKRSSAVYLGGCLAL
FT GVIGSILWPTEKTQPVAKTDVPAVKAEPATPTFEYADKTLKEYRNEPKETRHEIVKDYV
FT GFKGVQASATDVFYACMSEYTFTKDDALKLSDVLGWCFNDFEKDPQSLNNKINLDEFQG
FT NFSGWDGSYRPLEKLIKASMNDDSSYKHVSTVYHLILNKDPHAVVKTTFRGTNAYGGVV
FT KQTVAARVNVRTGEVDSILDN"
FT variation 29691..30304
FT /note="del97"
FT /replace=""
FT /gene="orf97"
FT terminator 30436..30463
FT /note="t95b; p95 transcript terminator"
SQ Sequence 30624 BP; 7461 A; 7801 C; 8456 G; 6906 T; 0 other;