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Commit 06d34496 authored by tjc's avatar tjc
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add gene_synonym to 3UTR, 5UTR and intron

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@11441 ee4ac58c-ac51-4696-9907-e4b3aa274f04
parent 67cd0d25
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...@@ -7,9 +7,9 @@ ...@@ -7,9 +7,9 @@
- EC_number PCR_conditions allele anticodon bound_moiety cell_line cell_type chromosome citation clone clone_lib codon codon_start cons_splice country cultivar db_xref dev_stage direction ecotype environmental_sa evidence exception focus frequency function gene germline haplotype inference insertion_seq isolate isolation_source lab_host label locus_tag macronuclear map mod_base mol_type note number organelle organism partial phenotype plasmid pop_variant product protein_id proviral pseudo rearranged replace rpt_family rpt_type rpt_unit segment sequenced_mol serotype serovar sex specific_host specimen_voucher standard_name strain sub_clone sub_species sub_strain tissue_lib tissue_type transgenic transl_except transl_table translation transposon usedin variety virion - EC_number PCR_conditions allele anticodon bound_moiety cell_line cell_type chromosome citation clone clone_lib codon codon_start cons_splice country cultivar db_xref dev_stage direction ecotype environmental_sa evidence exception focus frequency function gene germline haplotype inference insertion_seq isolate isolation_source lab_host label locus_tag macronuclear map mod_base mol_type note number organelle organism partial phenotype plasmid pop_variant product protein_id proviral pseudo rearranged replace rpt_family rpt_type rpt_unit segment sequenced_mol serotype serovar sex specific_host specimen_voucher standard_name strain sub_clone sub_species sub_strain tissue_lib tissue_type transgenic transl_except transl_table translation transposon usedin variety virion
-10_signal allele citation db_xref evidence function gene inference label locus_tag map note operon partial standard_name usedin -10_signal allele citation db_xref evidence function gene inference label locus_tag map note operon partial standard_name usedin
-35_signal allele citation db_xref evidence function gene inference label locus_tag map note operon partial standard_name usedin -35_signal allele citation db_xref evidence function gene inference label locus_tag map note operon partial standard_name usedin
3'UTR allele citation db_xref evidence function gene inference label locus_tag map note partial standard_name usedin 3'UTR allele citation db_xref evidence function gene inference label locus_tag map note partial standard_name usedin gene_synonym
3'clip allele citation db_xref evidence function gene inference label locus_tag map note partial standard_name usedin 3'clip allele citation db_xref evidence function gene inference label locus_tag map note partial standard_name usedin
5'UTR allele citation db_xref evidence function gene inference label locus_tag map note partial standard_name usedin 5'UTR allele citation db_xref evidence function gene inference label locus_tag map note partial standard_name usedin gene_synonym
5'clip allele citation db_xref evidence function gene inference label locus_tag map note partial standard_name usedin 5'clip allele citation db_xref evidence function gene inference label locus_tag map note partial standard_name usedin
CAAT_signal allele citation db_xref evidence gene inference label locus_tag map note partial usedin CAAT_signal allele citation db_xref evidence gene inference label locus_tag map note partial usedin
CDS EC_number allele citation codon codon_start db_xref evidence exception function gene inference label locus_tag map note number operon partial product protein_id pseudo standard_name transl_except transl_table translation usedin gene_synonym CDS EC_number allele citation codon codon_start db_xref evidence exception function gene inference label locus_tag map note number operon partial product protein_id pseudo standard_name transl_except transl_table translation usedin gene_synonym
...@@ -33,7 +33,7 @@ exon EC_number allele citation codon codon_start db_xref evidence fun ...@@ -33,7 +33,7 @@ exon EC_number allele citation codon codon_start db_xref evidence fun
gap @estimated_length gap @estimated_length
gene allele citation db_xref evidence function gene inference label locus_tag map note operon partial phenotype product pseudo standard_name usedin gene_synonym gene allele citation db_xref evidence function gene inference label locus_tag map note operon partial phenotype product pseudo standard_name usedin gene_synonym
iDNA allele citation db_xref evidence function gene inference label locus_tag map note number partial standard_name usedin iDNA allele citation db_xref evidence function gene inference label locus_tag map note number partial standard_name usedin
intron allele citation cons_splice db_xref evidence function gene inference label locus_tag map note number partial standard_name usedin intron allele citation cons_splice db_xref evidence function gene inference label locus_tag map note number partial standard_name usedin gene_synonym
mRNA allele citation db_xref evidence exception function gene inference label locus_tag map note operon partial product pseudo standard_name transcript_id usedin mRNA allele citation db_xref evidence exception function gene inference label locus_tag map note operon partial product pseudo standard_name transcript_id usedin
mat_peptide EC_number allele citation codon codon_start db_xref evidence function gene inference label locus_tag map note partial product pseudo standard_name transl_except usedin mat_peptide EC_number allele citation codon codon_start db_xref evidence function gene inference label locus_tag map note partial product pseudo standard_name transl_except usedin
misc_RNA allele citation db_xref evidence function gene inference label locus_tag map note operon partial product standard_name usedin misc_RNA allele citation db_xref evidence function gene inference label locus_tag map note operon partial product standard_name usedin
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