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Commit 07e051c9 authored by tjc's avatar tjc
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tidy

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@4253 ee4ac58c-ac51-4696-9907-e4b3aa274f04
parent da798bbd
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...@@ -20,7 +20,7 @@ ...@@ -20,7 +20,7 @@
* along with this program; if not, write to the Free Software * along with this program; if not, write to the Free Software
* Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.
* *
* $Header: //tmp/pathsoft/artemis/uk/ac/sanger/artemis/io/GFFStreamFeature.java,v 1.24 2006-03-31 10:52:06 tjc Exp $ * $Header: //tmp/pathsoft/artemis/uk/ac/sanger/artemis/io/GFFStreamFeature.java,v 1.25 2006-04-04 14:26:28 tjc Exp $
*/ */
package uk.ac.sanger.artemis.io; package uk.ac.sanger.artemis.io;
...@@ -30,13 +30,13 @@ import uk.ac.sanger.artemis.util.*; ...@@ -30,13 +30,13 @@ import uk.ac.sanger.artemis.util.*;
import java.io.*; import java.io.*;
import java.util.Hashtable; import java.util.Hashtable;
import java.util.Enumeration; import java.util.Enumeration;
import java.util.StringTokenizer;
/** /**
* A StreamFeature that thinks it is a GFF feature. * A StreamFeature that thinks it is a GFF feature.
* *
* @author Kim Rutherford * @author Kim Rutherford
* @version $Id: GFFStreamFeature.java,v 1.24 2006-03-31 10:52:06 tjc Exp $ * @version $Id: GFFStreamFeature.java,v 1.25 2006-04-04 14:26:28 tjc Exp $
**/ **/
public class GFFStreamFeature extends SimpleDocumentFeature public class GFFStreamFeature extends SimpleDocumentFeature
...@@ -172,7 +172,7 @@ public class GFFStreamFeature extends SimpleDocumentFeature ...@@ -172,7 +172,7 @@ public class GFFStreamFeature extends SimpleDocumentFeature
// parse the rest of the line as ACeDB format attributes // parse the rest of the line as ACeDB format attributes
final Hashtable attributes = parseAttributes(rest_of_line); final Hashtable attributes = parseAttributes(rest_of_line);
final String type = (String)line_bits.elementAt(2); // final String type = (String)line_bits.elementAt(2);
for(final java.util.Enumeration attribute_enum = attributes.keys(); for(final java.util.Enumeration attribute_enum = attributes.keys();
attribute_enum.hasMoreElements();) attribute_enum.hasMoreElements();)
...@@ -520,7 +520,6 @@ public class GFFStreamFeature extends SimpleDocumentFeature ...@@ -520,7 +520,6 @@ public class GFFStreamFeature extends SimpleDocumentFeature
{ {
final StringBuffer buffer = new StringBuffer(); final StringBuffer buffer = new StringBuffer();
final QualifierVector qualifiers = getQualifiers(); final QualifierVector qualifiers = getQualifiers();
final QualifierVector qualifiers_to_write = new QualifierVector();
final String names[] = { "ID", "Name", "Alias", "Parent", final String names[] = { "ID", "Name", "Alias", "Parent",
"Target", "Gap", "Note", "Target", "Gap", "Note",
......
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