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2b360d64

Commit 2b360d64 authored 13 years ago by tcarver

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read and parse VCF/BCF header

parent d188a803

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Changes 6

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uk/ac/sanger/artemis/components/variant/AbstractVCFReader.java 83 additions, 0 deletions

.../sanger/artemis/components/variant/AbstractVCFReader.java
uk/ac/sanger/artemis/components/variant/BCFReader.java 9 additions, 1 deletion

uk/ac/sanger/artemis/components/variant/BCFReader.java
uk/ac/sanger/artemis/components/variant/IOUtils.java 1 addition, 1 deletion

uk/ac/sanger/artemis/components/variant/IOUtils.java
uk/ac/sanger/artemis/components/variant/VCFFilter.java 343 additions, 41 deletions

uk/ac/sanger/artemis/components/variant/VCFFilter.java
uk/ac/sanger/artemis/components/variant/VCFRecord.java 15 additions, 0 deletions

uk/ac/sanger/artemis/components/variant/VCFRecord.java
uk/ac/sanger/artemis/components/variant/VCFview.java 17 additions, 16 deletions

uk/ac/sanger/artemis/components/variant/VCFview.java

with 468 additions and 59 deletions

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