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Commit 30cf4036 authored by tcarver's avatar tcarver
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fix for switching contig

parent d9f908a2
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......@@ -167,6 +167,7 @@ public class IndexFastaStream extends StreamSequence
len = getLengthByIndex(seqIndex);
contig = getContigByIndex(seqIndex);
basesCache = null;
}
/**
......@@ -204,6 +205,7 @@ public class IndexFastaStream extends StreamSequence
for(int idx=0; idx<seq.length(); idx++)
basesCache.put(i+idx, seq.charAt(idx));
}
return (Character)basesCache.get(i);
}
......
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