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Commit 314aaa81 authored by tjc's avatar tjc
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use history qualifiers rather than private qualifiers and store them as feature_cvterms

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@13338 ee4ac58c-ac51-4696-9907-e4b3aa274f04
parent 894def36
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......@@ -137,8 +137,8 @@ public class ChadoTransactionManager
public static String PRODUCT_DB = "PRODUCT";
public static String PRODUCT_CV =
Options.getOptions().getProperty("product_cvname");
public static String PRIVATE_CV =
Options.getOptions().getProperty("private_cvname");
public static String HISTORY_CV =
Options.getOptions().getProperty("history_cvname");
// number of SQL commands successfully processed during a commit
public static int commitReturnValue = 0;
......@@ -159,7 +159,7 @@ public class ChadoTransactionManager
{
logger4j.debug("PRODUCT STORED AS A CV (product_cv=yes) IN "+PRODUCT_CV);
int nsize = 4;
if(PRIVATE_CV != null)
if(HISTORY_CV != null)
nsize++;
CV_NAME = new String[]
......@@ -172,7 +172,7 @@ public class ChadoTransactionManager
{
logger4j.debug("PRODUCT STORED AS A FEATUREPROP (product_cv=no)");
int nsize = 3;
if(PRIVATE_CV != null)
if(HISTORY_CV != null)
nsize++;
CV_NAME = new String[]
......@@ -180,8 +180,8 @@ public class ChadoTransactionManager
"controlled_curation",
"class" };
}
if(PRIVATE_CV != null)
CV_NAME[CV_NAME.length-1] = "private";
if(HISTORY_CV != null)
CV_NAME[CV_NAME.length-1] = "history";
logger4j.debug("SYNONYM NAMES ARE STORED IN "+SYNONYM_TAG_CVNAME);
}
......@@ -2316,8 +2316,8 @@ public class ChadoTransactionManager
cvName = "CC_";
else if(qualifier_name.equals("product"))
cvName = PRODUCT_CV;
else if(qualifier_name.equals("private"))
cvName = PRIVATE_CV;
else if(qualifier_name.equals("history"))
cvName = HISTORY_CV;
for(int i=0; i<strings.size(); i++)
{
......
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