add getFeatureLocsByListOfIds

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8880 ee4ac58c-ac51-4696-9907-e4b3aa274f04

uk/ac/sanger/artemis/chado/GmodDAO.java

@@ -54,6 +54,14 @@ public abstract class GmodDAO
   public abstract List getClustersByFeatureIds(final List featureIds);
   public abstract List getParentFeaturesByChildFeatureIds(final List subjectIds);
   
+  /**
+   * Return a <code>List</code> of featureLoc's corresponding for a
+   * <code>List</code> of feature_id's.
+   * @param featureIds the list of featureIds to search
+   * @return a (possibly empty) List<Feature>
+   */
+  public abstract List getFeatureLocsByListOfIds(final Collection featureIds);
+  
   /**
    * Return all the Feature.featureDbXRefs for a <code>List</code> of feature_id's. 
    * These are grouped by their feature_id and returned in a <code>List</code>

uk/ac/sanger/artemis/chado/IBatisDAO.java

@@ -120,6 +120,11 @@ public class IBatisDAO extends GmodDAO
     return sqlMap.queryForList("getResidueFeaturesByOrganismCommonName",commonName);
   }
   
+  public List getFeatureLocsByListOfIds(final Collection featureIds)
+  {
+    return sqlMap.queryForList("getFeatureLocsByListOfIds",featureIds);
+  }
+  
   public List getParentFeaturesByChildFeatureIds(final List featureIds)
   {
     return sqlMap.queryForList("getParentFeaturesByChildFeatureIds",featureIds);

uk/ac/sanger/artemis/chado/JdbcDAO.java

@@ -28,6 +28,7 @@ import javax.swing.JPasswordField;
 
 import java.sql.*;
 import java.io.*;
+import java.util.Collection;
 import java.util.List;
 import java.util.Vector;
 
@@ -141,6 +142,11 @@ public class JdbcDAO extends GmodDAO
     return null;
   }
   
+  public List getFeatureLocsByListOfIds(final Collection featureIds)
+  {
+    return null;
+  }
+  
   public Feature getResiduesByUniqueName(String uniqueName)
   {
     // TODO Auto-generated method stub