chado to embl mappings

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8237 ee4ac58c-ac51-4696-9907-e4b3aa274f04

etc/key_mapping

+# CHADO (SO) database key mappings (used for writing out to file)
+#
+# CHADO                 	map     		qualifier (optional)
+pseudogenic_transcript      mRNA            pseudo
+pseudogenic_exon            CDS             pseudo
+pseudogene                  gene            pseudo
+polypeptide_motif           CDS_motif
+five_prime_UTR              5'UTR
+three_prime_UTR             3'UTR
+polypeptide_domain          CDS_domain
+region                      misc_feature
+remark                      misc_feature
+sequence_difference         misc_feature
+SECIS_element               misc_feature    note=SECIS_element

etc/qualifier_mapping

+# CHADO database qualifier mappings (used for writing out to file)
+#
+# CHADO                 	map     	
+comment                     note
+Dbxref                      db_xref
+private                     note
+orthologous_to              ortholog
+paralogous_to               paralog
+#
+# CHADO qualifiers to be ignored
+timelastmodified
+ID
+feature_id
+Parent
+Derives_from
+feature_relationship_rank
+isObsolete
\ No newline at end of file