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Commit 79cda9e3 authored by tjc's avatar tjc
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move drawMax()

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@15672 ee4ac58c-ac51-4696-9907-e4b3aa274f04
parent 495890d1
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...@@ -26,7 +26,6 @@ package uk.ac.sanger.artemis.components.alignment; ...@@ -26,7 +26,6 @@ package uk.ac.sanger.artemis.components.alignment;
import java.awt.AlphaComposite; import java.awt.AlphaComposite;
import java.awt.Color; import java.awt.Color;
import java.awt.FontMetrics;
import java.awt.Graphics; import java.awt.Graphics;
import java.awt.Graphics2D; import java.awt.Graphics2D;
import java.awt.GridBagConstraints; import java.awt.GridBagConstraints;
...@@ -52,15 +51,12 @@ import net.sf.samtools.SAMRecord; ...@@ -52,15 +51,12 @@ import net.sf.samtools.SAMRecord;
public class CoveragePanel extends AbstractGraphPanel public class CoveragePanel extends AbstractGraphPanel
{ {
private static final long serialVersionUID = 1L; private static final long serialVersionUID = 1L;
private BamView bamView;
private static LineAttributes lines[]; private static LineAttributes lines[];
private boolean includeCombined = false; private boolean includeCombined = false;
private Hashtable<String, int[]> plots; private Hashtable<String, int[]> plots;
private int combinedCoverage[]; private int combinedCoverage[];
private int nBins; private int nBins;
private int windowSize;
private int max;
private boolean redraw = false; private boolean redraw = false;
private boolean setMaxBases = false; private boolean setMaxBases = false;
...@@ -158,18 +154,7 @@ import net.sf.samtools.SAMRecord; ...@@ -158,18 +154,7 @@ import net.sf.samtools.SAMRecord;
} }
max = 0; max = 0;
} }
protected void drawMax(Graphics2D g2)
{
String maxStr = Float.toString(max/windowSize);
FontMetrics fm = getFontMetrics(getFont());
g2.setColor(Color.black);
int xpos = bamView.getJspView().getVisibleRect().width - fm.stringWidth(maxStr) -
bamView.getJspView().getVerticalScrollBar().getWidth();
g2.drawString(maxStr, xpos, fm.getHeight());
}
private void drawPlot(Graphics2D g2) private void drawPlot(Graphics2D g2)
{ {
init(); init();
......
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