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Commit 7e1482ca authored by tjc's avatar tjc
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add getFeatureDbXRefsByFeatureId

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@6235 ee4ac58c-ac51-4696-9907-e4b3aa274f04
parent d2c0c58c
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......@@ -10,20 +10,25 @@
<typeAlias alias="FeatureDbXRef"
type="org.gmod.schema.sequence.FeatureDbXRef"/>
<resultMap id="select-feature-dbxref"
<resultMap id="map-feature-dbxref"
class="FeatureDbXRef">
<result property="feature.featureId" column="feature_id"/>
<result property="dbXRef.db.name" column="name"/>
<result property="dbXRef.accession" column="accession"/>
<result property="dbXRef.version" column="version"/>
<result property="dbXRef.description" column="description"/>
<result property="current" column="is_current"/>
<result property="current" column="is_current" nullValue="false"/>
</resultMap>
<resultMap id="map-feature-of-feature-dbxref"
class="Feature" groupBy="featureId">
<result property="featureId" column="feature_id"/>
<result property="featureDbXRefs" resultMap="FeatureDbXRef.map-feature-dbxref" />
</resultMap>
<select id="getFeatureDbXRef"
parameterClass="org.gmod.schema.sequence.Feature"
resultMap="select-feature-dbxref">
resultMap="map-feature-dbxref">
SELECT db.name, dbx.accession, dbx.version, dbx.description,
dbx_f.feature_id, dbx_f.is_current
FROM feature_dbxref dbx_f
......@@ -39,10 +44,20 @@
ORDER BY f.type_id, uniquename
</select>
<select id="getFeatureDbXRefsByFeatureId" resultMap="map-feature-of-feature-dbxref">
SELECT db.name, dbx.accession, dbx.version, dbx.description,
f.feature_id, dbx_f.is_current
FROM feature_dbxref dbx_f
LEFT JOIN dbxref dbx ON dbx.dbxref_id=dbx_f.dbxref_id
LEFT JOIN db ON db.db_id=dbx.db_id
RIGHT JOIN feature f ON dbx_f.feature_id=f.feature_id
WHERE f.feature_id IN <iterate open="(" close=")" conjunction=","> $[]$ </iterate>
ORDER BY f.type_id, uniquename
</select>
<select id="getFeatureDbXRefsBySrcFeatureId"
parameterClass="java.lang.Integer"
resultMap="select-feature-dbxref">
resultMap="map-feature-dbxref">
SELECT db.name, dbx.accession, dbx.version, dbx.description,
dbx_f.feature_id, dbx_f.is_current
FROM feature_dbxref dbx_f
......
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