Skip to content
Snippets Groups Projects
Commit 84c0adfa authored by tjc's avatar tjc
Browse files

changing processed_transcript for loading

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@11037 ee4ac58c-ac51-4696-9907-e4b3aa274f04
parent 251e6e33
No related branches found
No related tags found
No related merge requests found
......@@ -53,7 +53,8 @@ make ontologies
<li><b>Examples of Loading Sequences into the Database.</b>
<p><b>NC_001142:</b><p>
You may find the following loading fails and you need to insert 'processed_transcript'
as a sequence ontology cvterm.
as a sequence ontology cvterm. Or change them to 'mature_transcript' in the gff file
(e.g. sed s'|processed_transcript|mature_transcript|' NC_001142.gff).
<pre>
cat NC_001142.gbk | perl /usr/local/bin/bp_genbank2gff3.pl -noCDS -in stdin -out stdout > NC_001142.gff
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Please register or to comment