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Commit 88725245 authored by tjc's avatar tjc
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update 

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@12871 ee4ac58c-ac51-4696-9907-e4b3aa274f04
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Version 11+ Version 11+
It is now possible to add user plots from the command line using the It is now possible to add user plots from the command line using the
JVM userplot option, e.g. art -Duserplot=/pathToFile/userPlot. JVM userplot option, e.g. art -Duserplot=/pathToFile/userPlot
and for multiple plots this is comma separated
art -Duserplot='/pathToFile/userPlot1,/pathToFile/userPlot2'
Added support to be able to read BAM files to display read alignments. Added support to be able to read BAM files to display read alignments.
It uses picard (http://picard.sourceforge.net/) to read from the BAM file It uses picard (http://picard.sourceforge.net/) to read from the BAM file
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